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The map label for this gene is ydaM [H]

Identifier: 78780136

GI number: 78780136

Start: 1642807

End: 1644108

Strand: Reverse

Name: ydaM [H]

Synonym: PMT9312_1751

Alternate gene names: 78780136

Gene position: 1644108-1642807 (Counterclockwise)

Preceding gene: 78780137

Following gene: 78780131

Centisome position: 96.19

GC content: 32.03

Gene sequence:

>1302_bases
ATGAGTAAGGGTTTTTATAAAAATCGAAGATTGAAGTCGTTTATATTTCTTAGCGCTTGTTTTTTAGTAGCTCTTATTCC
TCATGTTTACAATATCGAAAGTTTCTTTTACCTTATATTGACTCTTTCTTTTGTGATTGTTTTGTACGGTTTAATAGTTA
TTTCTAGAAATTTCAAAAGGAAAAACGTTTCAAATACTGAAAGCAGCAGAATTAGCAATAAAGAGTTACCCGTGCTTGAT
ATTTTAGTCGCAGCGAGAGATGAAGAGAATGTCATAGCAAGATTAGTTGAAAGATTATTTAATTTAGATTATCCAACAAA
TAAATTAAATATTTACATAATCGATGATGGCAGTTCTGATAAGACGCCTTTAATTTTAGATCGATTATCTAGACAATATG
AAAAGCTAAAAGTAGTTAGTCGTTCTCCAAACGCAGGAGGGGGAAAGTCAGGAGCTTTAAATTATGCCTTGAAGTTTACT
CATGGTGAATGGTTATTAGTTTTGGATGCTGATGCTCAATTAAAACAAGATTCTTTGATCAGGTTATTTAGTTTTGTAAA
AGAGGGTGATTGGTCTGCAGTTCAATTAAGAAAATCAGTAACAAATGTAAGTAAGAACTTTTTAACTTCATGTCAGTCAA
TGGAGATGGCTATGGACGCAATCTTTCAATATGGAAGATTGTCAGTTGCTGGAGTTTCTGAATTAAGGGGAAATGGTCAA
TTAATTAAGAAAGATACATTATTGGCATGTGGTTCTTTTAATGAAGACACAGTTACAGATGATCTTGATTTAAGTTTAAG
GTTATTATTATCAAAATCTAGAATTGGAATCTTATGGGATCCTCCTGTCATGGAGGAAGCAGTTGAGAATTTAAATGCTT
TATTATCGCAAAGGCAAAGATGGGCAGAGGGGGGTTTGCAACGATTCTTTGATTATGGGGACCAATTAGTTACTAATAAA
ATTGATTATTTGCAAAAATTTGATTTAACTTACTTCTTCATCTTGCAATATGCACTACCAATAATTTCTATTTTTGATTT
AGTTCTCAGTATTGCTTTATTAGATTCACCAATTTACTGGCCTATTTCATTCACAGCTTTTATGTTATCTGGAATTGCTT
TTTGGTACGGTTCTTCCTGCAAAAGCGAAGTACCTGTATTGCAAGAAAAAAATTTTTTGATGGTATTTGTTTCGGTTTTT
TATTTATCACATTGGTTTCTAGTAATCCCCTGGGTAACAATAAAGATGTCTATTTTCCCAAAAAAGATACTTTGGCGAAA
AACTCTTCATACTGGAGTTTAA

Upstream 100 bases:

>100_bases
CTCTTATGTACAAATATTGAATCATTACTATCGAGATGTAAAACTAAAAAAAATTGAGATATTGTCTCAAGGAAAATTAA
ATAATTAAAAATTTACTTTT

Downstream 100 bases:

>100_bases
TTTATTCATCAAGGTCTATAATTTCTCCATTAAAAAAATTTGCTAAGTTTTTTGAACTATCATCATAAGTTTCCTCGTTA
GATATTTTTGTTGAAGAATT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MSKGFYKNRRLKSFIFLSACFLVALIPHVYNIESFFYLILTLSFVIVLYGLIVISRNFKRKNVSNTESSRISNKELPVLD
ILVAARDEENVIARLVERLFNLDYPTNKLNIYIIDDGSSDKTPLILDRLSRQYEKLKVVSRSPNAGGGKSGALNYALKFT
HGEWLLVLDADAQLKQDSLIRLFSFVKEGDWSAVQLRKSVTNVSKNFLTSCQSMEMAMDAIFQYGRLSVAGVSELRGNGQ
LIKKDTLLACGSFNEDTVTDDLDLSLRLLLSKSRIGILWDPPVMEEAVENLNALLSQRQRWAEGGLQRFFDYGDQLVTNK
IDYLQKFDLTYFFILQYALPIISIFDLVLSIALLDSPIYWPISFTAFMLSGIAFWYGSSCKSEVPVLQEKNFLMVFVSVF
YLSHWFLVIPWVTIKMSIFPKKILWRKTLHTGV

Sequences:

>Translated_433_residues
MSKGFYKNRRLKSFIFLSACFLVALIPHVYNIESFFYLILTLSFVIVLYGLIVISRNFKRKNVSNTESSRISNKELPVLD
ILVAARDEENVIARLVERLFNLDYPTNKLNIYIIDDGSSDKTPLILDRLSRQYEKLKVVSRSPNAGGGKSGALNYALKFT
HGEWLLVLDADAQLKQDSLIRLFSFVKEGDWSAVQLRKSVTNVSKNFLTSCQSMEMAMDAIFQYGRLSVAGVSELRGNGQ
LIKKDTLLACGSFNEDTVTDDLDLSLRLLLSKSRIGILWDPPVMEEAVENLNALLSQRQRWAEGGLQRFFDYGDQLVTNK
IDYLQKFDLTYFFILQYALPIISIFDLVLSIALLDSPIYWPISFTAFMLSGIAFWYGSSCKSEVPVLQEKNFLMVFVSVF
YLSHWFLVIPWVTIKMSIFPKKILWRKTLHTGV
>Mature_432_residues
SKGFYKNRRLKSFIFLSACFLVALIPHVYNIESFFYLILTLSFVIVLYGLIVISRNFKRKNVSNTESSRISNKELPVLDI
LVAARDEENVIARLVERLFNLDYPTNKLNIYIIDDGSSDKTPLILDRLSRQYEKLKVVSRSPNAGGGKSGALNYALKFTH
GEWLLVLDADAQLKQDSLIRLFSFVKEGDWSAVQLRKSVTNVSKNFLTSCQSMEMAMDAIFQYGRLSVAGVSELRGNGQL
IKKDTLLACGSFNEDTVTDDLDLSLRLLLSKSRIGILWDPPVMEEAVENLNALLSQRQRWAEGGLQRFFDYGDQLVTNKI
DYLQKFDLTYFFILQYALPIISIFDLVLSIALLDSPIYWPISFTAFMLSGIAFWYGSSCKSEVPVLQEKNFLMVFVSVFY
LSHWFLVIPWVTIKMSIFPKKILWRKTLHTGV

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI87082284, Length=313, Percent_Identity=24.6006389776358, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1787259, Length=249, Percent_Identity=25.3012048192771, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 49508; Mature: 49377

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGFYKNRRLKSFIFLSACFLVALIPHVYNIESFFYLILTLSFVIVLYGLIVISRNFKR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KNVSNTESSRISNKELPVLDILVAARDEENVIARLVERLFNLDYPTNKLNIYIIDDGSSD
CCCCCCHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC
KTPLILDRLSRQYEKLKVVSRSPNAGGGKSGALNYALKFTHGEWLLVLDADAQLKQDSLI
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCHHHHH
RLFSFVKEGDWSAVQLRKSVTNVSKNFLTSCQSMEMAMDAIFQYGRLSVAGVSELRGNGQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHCCCCC
LIKKDTLLACGSFNEDTVTDDLDLSLRLLLSKSRIGILWDPPVMEEAVENLNALLSQRQR
EEECCCEEEECCCCCCCCCCCCCHHHHHHECCCCEEEEECCHHHHHHHHHHHHHHHHHHH
WAEGGLQRFFDYGDQLVTNKIDYLQKFDLTYFFILQYALPIISIFDLVLSIALLDSPIYW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PISFTAFMLSGIAFWYGSSCKSEVPVLQEKNFLMVFVSVFYLSHWFLVIPWVTIKMSIFP
HHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHH
KKILWRKTLHTGV
HHHHHHHHHHCCC
>Mature Secondary Structure 
SKGFYKNRRLKSFIFLSACFLVALIPHVYNIESFFYLILTLSFVIVLYGLIVISRNFKR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KNVSNTESSRISNKELPVLDILVAARDEENVIARLVERLFNLDYPTNKLNIYIIDDGSSD
CCCCCCHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC
KTPLILDRLSRQYEKLKVVSRSPNAGGGKSGALNYALKFTHGEWLLVLDADAQLKQDSLI
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCHHHHH
RLFSFVKEGDWSAVQLRKSVTNVSKNFLTSCQSMEMAMDAIFQYGRLSVAGVSELRGNGQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHCCCCC
LIKKDTLLACGSFNEDTVTDDLDLSLRLLLSKSRIGILWDPPVMEEAVENLNALLSQRQR
EEECCCEEEECCCCCCCCCCCCCHHHHHHECCCCEEEEECCHHHHHHHHHHHHHHHHHHH
WAEGGLQRFFDYGDQLVTNKIDYLQKFDLTYFFILQYALPIISIFDLVLSIALLDSPIYW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PISFTAFMLSGIAFWYGSSCKSEVPVLQEKNFLMVFVSVFYLSHWFLVIPWVTIKMSIFP
HHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHH
KKILWRKTLHTGV
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]