Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

Click here to switch to the map view.

The map label for this gene is mreC [C]

Identifier: 78780099

GI number: 78780099

Start: 1602247

End: 1602999

Strand: Reverse

Name: mreC [C]

Synonym: PMT9312_1714

Alternate gene names: 78780099

Gene position: 1602999-1602247 (Counterclockwise)

Preceding gene: 78780100

Following gene: 78780098

Centisome position: 93.79

GC content: 31.74

Gene sequence:

>753_bases
ATGTTAGATATCCGACGAATTTCTACTAGTCGTTGGTGGCATAAAAAGCAAAGTTGGTTTTTCTTCGGAGTTTTTGTATT
TTTAGTTTTTGTGAGGATATCAAAGGGATCTTTTTATAAGGATTTTTATTATTTTATTTCAAAGCCGTTTTGGCCTGGTC
AATTTCAAAAAGAAGTTATACTAGAGAGTATTGATCAAGAATCTTTAATAAAGTTAAATCTTCTTAAAAAGGACAATTCA
AGACTGCGGGAAATCCTATCTCTTCAAGAATCAACTAATAATGATAATATTTCAGCTGCAGTTATTTCTAGAAAAACAGG
TAGTTGGTGGAGACAAATAATATTAAATAAAGGTTCAAAAGATGGAGTGGAAATTGGTAGTACTGTTATTGGTCCAGGGG
GATTATTAGGAAGAGTAAATAATACTTCTTTATTTACTTCGTCGGTAACTTTAATAACCTCTCCAGAAAGTAAGTTAGGC
GTTTGGGTGGATAGAATTCAAATTAATGGATTACTGGTCGGTTTAGGGTCTGATTTTCCTAGCTTAATACTTTTTTCAAA
AGATGCTGATATTAAAGTCGGAGATTTTGTATCATCTTCTCCTGCTAGTACGTTATTACCTCCAAATATACCCATTGGTA
TTGTCCAATCTATAGATGAGACATTTAAAGCAAAAAAAACGGCAAAAATATCACTTTTAGCAAAACCTCACTTAATTGAT
TGGGTGCAAATTTTAAAAGTCAATATTGAATGA

Upstream 100 bases:

>100_bases
GTAGTTAATGGTTGTGGAGAGGTTTTGGATGATTTTAAAAAACTGAAAAGAGTTGTCGATACTCCAGACTTTATAAGGAA
CGCCATAAGAGATTAATATT

Downstream 100 bases:

>100_bases
ATACATTTTTCAAAAAAAAATCATCAATAATATCATTTATTTTTATCCCAATTATTTTTTTGTGGCATCCAAATTGGCTT
GGATTGTTAGGTGTTCAGCC

Product: rod shape-determining protein MreC

Products: NA

Alternate protein names: Rod Shape-Determining Protein; Cell Shape-Determining Protein; Rod Shape-Determining MreC Transmembrane Protein; MreC Rod Shape-Determining Protein; Rod Shape-Determining Protein Mrec; Cell Shape-Determining Protein MreC; Rod Shape Determining Protein MreC; Cell Wall Complex MreBCD Transmembrane Component MreC; Transmembrane Component Of Cell Wall Complex MreBCD

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MLDIRRISTSRWWHKKQSWFFFGVFVFLVFVRISKGSFYKDFYYFISKPFWPGQFQKEVILESIDQESLIKLNLLKKDNS
RLREILSLQESTNNDNISAAVISRKTGSWWRQIILNKGSKDGVEIGSTVIGPGGLLGRVNNTSLFTSSVTLITSPESKLG
VWVDRIQINGLLVGLGSDFPSLILFSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETFKAKKTAKISLLAKPHLID
WVQILKVNIE

Sequences:

>Translated_250_residues
MLDIRRISTSRWWHKKQSWFFFGVFVFLVFVRISKGSFYKDFYYFISKPFWPGQFQKEVILESIDQESLIKLNLLKKDNS
RLREILSLQESTNNDNISAAVISRKTGSWWRQIILNKGSKDGVEIGSTVIGPGGLLGRVNNTSLFTSSVTLITSPESKLG
VWVDRIQINGLLVGLGSDFPSLILFSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETFKAKKTAKISLLAKPHLID
WVQILKVNIE
>Mature_250_residues
MLDIRRISTSRWWHKKQSWFFFGVFVFLVFVRISKGSFYKDFYYFISKPFWPGQFQKEVILESIDQESLIKLNLLKKDNS
RLREILSLQESTNNDNISAAVISRKTGSWWRQIILNKGSKDGVEIGSTVIGPGGLLGRVNNTSLFTSSVTLITSPESKLG
VWVDRIQINGLLVGLGSDFPSLILFSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETFKAKKTAKISLLAKPHLID
WVQILKVNIE

Specific function: Involved In Formation Of The Rod Shape Of The Cell. May Also Contribute To Regulation Of Formation Of Penicillin-Binding Proteins. [C]

COG id: COG1792

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Inner Membrane-Anchored [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28136; Mature: 28136

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIRRISTSRWWHKKQSWFFFGVFVFLVFVRISKGSFYKDFYYFISKPFWPGQFQKEVI
CCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH
LESIDQESLIKLNLLKKDNSRLREILSLQESTNNDNISAAVISRKTGSWWRQIILNKGSK
HHHCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCC
DGVEIGSTVIGPGGLLGRVNNTSLFTSSVTLITSPESKLGVWVDRIQINGLLVGLGSDFP
CCCCCCCEEECCCCEEECCCCCEEEEEEEEEEECCCHHHCEEEEEEEEEEEEEECCCCCC
SLILFSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETFKAKKTAKISLLAKPHLID
EEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHH
WVQILKVNIE
EEEEEEEECC
>Mature Secondary Structure
MLDIRRISTSRWWHKKQSWFFFGVFVFLVFVRISKGSFYKDFYYFISKPFWPGQFQKEVI
CCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH
LESIDQESLIKLNLLKKDNSRLREILSLQESTNNDNISAAVISRKTGSWWRQIILNKGSK
HHHCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCC
DGVEIGSTVIGPGGLLGRVNNTSLFTSSVTLITSPESKLGVWVDRIQINGLLVGLGSDFP
CCCCCCCEEECCCCEEECCCCCEEEEEEEEEEECCCHHHCEEEEEEEEEEEEEECCCCCC
SLILFSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETFKAKKTAKISLLAKPHLID
EEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHH
WVQILKVNIE
EEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA