| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is mreC [C]
Identifier: 78780099
GI number: 78780099
Start: 1602247
End: 1602999
Strand: Reverse
Name: mreC [C]
Synonym: PMT9312_1714
Alternate gene names: 78780099
Gene position: 1602999-1602247 (Counterclockwise)
Preceding gene: 78780100
Following gene: 78780098
Centisome position: 93.79
GC content: 31.74
Gene sequence:
>753_bases ATGTTAGATATCCGACGAATTTCTACTAGTCGTTGGTGGCATAAAAAGCAAAGTTGGTTTTTCTTCGGAGTTTTTGTATT TTTAGTTTTTGTGAGGATATCAAAGGGATCTTTTTATAAGGATTTTTATTATTTTATTTCAAAGCCGTTTTGGCCTGGTC AATTTCAAAAAGAAGTTATACTAGAGAGTATTGATCAAGAATCTTTAATAAAGTTAAATCTTCTTAAAAAGGACAATTCA AGACTGCGGGAAATCCTATCTCTTCAAGAATCAACTAATAATGATAATATTTCAGCTGCAGTTATTTCTAGAAAAACAGG TAGTTGGTGGAGACAAATAATATTAAATAAAGGTTCAAAAGATGGAGTGGAAATTGGTAGTACTGTTATTGGTCCAGGGG GATTATTAGGAAGAGTAAATAATACTTCTTTATTTACTTCGTCGGTAACTTTAATAACCTCTCCAGAAAGTAAGTTAGGC GTTTGGGTGGATAGAATTCAAATTAATGGATTACTGGTCGGTTTAGGGTCTGATTTTCCTAGCTTAATACTTTTTTCAAA AGATGCTGATATTAAAGTCGGAGATTTTGTATCATCTTCTCCTGCTAGTACGTTATTACCTCCAAATATACCCATTGGTA TTGTCCAATCTATAGATGAGACATTTAAAGCAAAAAAAACGGCAAAAATATCACTTTTAGCAAAACCTCACTTAATTGAT TGGGTGCAAATTTTAAAAGTCAATATTGAATGA
Upstream 100 bases:
>100_bases GTAGTTAATGGTTGTGGAGAGGTTTTGGATGATTTTAAAAAACTGAAAAGAGTTGTCGATACTCCAGACTTTATAAGGAA CGCCATAAGAGATTAATATT
Downstream 100 bases:
>100_bases ATACATTTTTCAAAAAAAAATCATCAATAATATCATTTATTTTTATCCCAATTATTTTTTTGTGGCATCCAAATTGGCTT GGATTGTTAGGTGTTCAGCC
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein; Cell Shape-Determining Protein; Rod Shape-Determining MreC Transmembrane Protein; MreC Rod Shape-Determining Protein; Rod Shape-Determining Protein Mrec; Cell Shape-Determining Protein MreC; Rod Shape Determining Protein MreC; Cell Wall Complex MreBCD Transmembrane Component MreC; Transmembrane Component Of Cell Wall Complex MreBCD
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MLDIRRISTSRWWHKKQSWFFFGVFVFLVFVRISKGSFYKDFYYFISKPFWPGQFQKEVILESIDQESLIKLNLLKKDNS RLREILSLQESTNNDNISAAVISRKTGSWWRQIILNKGSKDGVEIGSTVIGPGGLLGRVNNTSLFTSSVTLITSPESKLG VWVDRIQINGLLVGLGSDFPSLILFSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETFKAKKTAKISLLAKPHLID WVQILKVNIE
Sequences:
>Translated_250_residues MLDIRRISTSRWWHKKQSWFFFGVFVFLVFVRISKGSFYKDFYYFISKPFWPGQFQKEVILESIDQESLIKLNLLKKDNS RLREILSLQESTNNDNISAAVISRKTGSWWRQIILNKGSKDGVEIGSTVIGPGGLLGRVNNTSLFTSSVTLITSPESKLG VWVDRIQINGLLVGLGSDFPSLILFSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETFKAKKTAKISLLAKPHLID WVQILKVNIE >Mature_250_residues MLDIRRISTSRWWHKKQSWFFFGVFVFLVFVRISKGSFYKDFYYFISKPFWPGQFQKEVILESIDQESLIKLNLLKKDNS RLREILSLQESTNNDNISAAVISRKTGSWWRQIILNKGSKDGVEIGSTVIGPGGLLGRVNNTSLFTSSVTLITSPESKLG VWVDRIQINGLLVGLGSDFPSLILFSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETFKAKKTAKISLLAKPHLID WVQILKVNIE
Specific function: Involved In Formation Of The Rod Shape Of The Cell. May Also Contribute To Regulation Of Formation Of Penicillin-Binding Proteins. [C]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28136; Mature: 28136
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDIRRISTSRWWHKKQSWFFFGVFVFLVFVRISKGSFYKDFYYFISKPFWPGQFQKEVI CCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH LESIDQESLIKLNLLKKDNSRLREILSLQESTNNDNISAAVISRKTGSWWRQIILNKGSK HHHCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCC DGVEIGSTVIGPGGLLGRVNNTSLFTSSVTLITSPESKLGVWVDRIQINGLLVGLGSDFP CCCCCCCEEECCCCEEECCCCCEEEEEEEEEEECCCHHHCEEEEEEEEEEEEEECCCCCC SLILFSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETFKAKKTAKISLLAKPHLID EEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHH WVQILKVNIE EEEEEEEECC >Mature Secondary Structure MLDIRRISTSRWWHKKQSWFFFGVFVFLVFVRISKGSFYKDFYYFISKPFWPGQFQKEVI CCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH LESIDQESLIKLNLLKKDNSRLREILSLQESTNNDNISAAVISRKTGSWWRQIILNKGSK HHHCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCC DGVEIGSTVIGPGGLLGRVNNTSLFTSSVTLITSPESKLGVWVDRIQINGLLVGLGSDFP CCCCCCCEEECCCCEEECCCCCEEEEEEEEEEECCCHHHCEEEEEEEEEEEEEECCCCCC SLILFSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETFKAKKTAKISLLAKPHLID EEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHH WVQILKVNIE EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA