| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is tyrA [H]
Identifier: 78780042
GI number: 78780042
Start: 1544563
End: 1545402
Strand: Direct
Name: tyrA [H]
Synonym: PMT9312_1657
Alternate gene names: 78780042
Gene position: 1544563-1545402 (Clockwise)
Preceding gene: 78780039
Following gene: 78780044
Centisome position: 90.37
GC content: 30.83
Gene sequence:
>840_bases ATGAAAATTGGAATAGTAGGATTAGGTTTAATTGGGGGTTCTTTAGGATTAAAACTCCAAAGTATAAATCATACAATTTA TGGAATAGCAAATAATGAATTTAATGAAAAAAAAGCTAAGGATAAAAAACTTGCAAATTTTGTTAGTTGTGATCTGAGCT TATTAAAAAAATGTGAGCTAATAATTTTGGCATTGCCTATCAAAGATTTGATCAGTCCGTCTCAAAAATTGGTATCATCA ATACCTCAGGCAACAATACTAACTGATGTAGGATCTGTTAAAGAACCAATTGTAAATACATGGGAAAATTTACATCCTCT ATTTATTGGATCTCATCCAATGGCAGGAACAGAAAAAAAAGGAGTTGATTCAGGTTTTGAAGGTCTTTTTAAAAATGCAA AATGGATTATTACTCCAACACAAAATAGTGATTTAAATGCAGTGAGAACAATTTCCGAGATCATAAAATCAATGGATTGT GAAATTTGCCAAGCTTCGCCAAAAGAGCATGATGAAGCAGTATCTCTAATTTCTCATCTTCCTATATTTTTAGCTTCTGC CCTAATTGAAACTGCGCATACAAAAAATAATCAATCTTTATTAGATCTCACGCAAAAATTAGCTGCTACAGGATTTGCTG ACACTTCGAGAGTTGGTGGCGGCAATGAACAACTAGGCCTAGATTTAGCTATTAATAATCAGATTAATGTTTTAAATTCC ATAAATAATTTTAAAAATAAGCTGAATATACTGGAATCGCTTATTAAAGAAAAAAATTGGGAGTTACTTTCTAACAAACT GGCTGAAGCAAAAGAAAACAGACAAAATTTTATAAACTAA
Upstream 100 bases:
>100_bases AAGCATTTATAATTAATTTCAAATACATACAAAATTTATGAACCTAATATACAAAAAATTGGTATCAATATAAATAAGAG GGTTTTGAATTAATCAATCT
Downstream 100 bases:
>100_bases AATTTTTTATACCTTTGGAAGCTAAAATTTGCCTTGAAACCATTAATGCAGACTGACTAACACCTGCAGTCCCCTCTCCT GGATAAATAGAATCTCCACA
Product: arogenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKIGIVGLGLIGGSLGLKLQSINHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCELIILALPIKDLISPSQKLVSS IPQATILTDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKKGVDSGFEGLFKNAKWIITPTQNSDLNAVRTISEIIKSMDC EICQASPKEHDEAVSLISHLPIFLASALIETAHTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINVLNS INNFKNKLNILESLIKEKNWELLSNKLAEAKENRQNFIN
Sequences:
>Translated_279_residues MKIGIVGLGLIGGSLGLKLQSINHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCELIILALPIKDLISPSQKLVSS IPQATILTDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKKGVDSGFEGLFKNAKWIITPTQNSDLNAVRTISEIIKSMDC EICQASPKEHDEAVSLISHLPIFLASALIETAHTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINVLNS INNFKNKLNILESLIKEKNWELLSNKLAEAKENRQNFIN >Mature_279_residues MKIGIVGLGLIGGSLGLKLQSINHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCELIILALPIKDLISPSQKLVSS IPQATILTDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKKGVDSGFEGLFKNAKWIITPTQNSDLNAVRTISEIIKSMDC EICQASPKEHDEAVSLISHLPIFLASALIETAHTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINVLNS INNFKNKLNILESLIKEKNWELLSNKLAEAKENRQNFIN
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 30461; Mature: 30461
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIVGLGLIGGSLGLKLQSINHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCEL CEEEEEEHHHHCCCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCE IILALPIKDLISPSQKLVSSIPQATILTDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKK EEEEECHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC GVDSGFEGLFKNAKWIITPTQNSDLNAVRTISEIIKSMDCEICQASPKEHDEAVSLISHL CCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHH PIFLASALIETAHTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINVLNS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHH INNFKNKLNILESLIKEKNWELLSNKLAEAKENRQNFIN HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIGIVGLGLIGGSLGLKLQSINHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCEL CEEEEEEHHHHCCCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCE IILALPIKDLISPSQKLVSSIPQATILTDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKK EEEEECHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC GVDSGFEGLFKNAKWIITPTQNSDLNAVRTISEIIKSMDCEICQASPKEHDEAVSLISHL CCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHH PIFLASALIETAHTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINVLNS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHH INNFKNKLNILESLIKEKNWELLSNKLAEAKENRQNFIN HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3106153; 9384377 [H]