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The map label for this gene is ndhN [H]

Identifier: 78780036

GI number: 78780036

Start: 1539084

End: 1539560

Strand: Direct

Name: ndhN [H]

Synonym: PMT9312_1651

Alternate gene names: 78780036

Gene position: 1539084-1539560 (Clockwise)

Preceding gene: 78780005

Following gene: 78780037

Centisome position: 90.05

GC content: 36.69

Gene sequence:

>477_bases
ATGCCATTACTTCTCACAGGGAAACAGTTTCATAACGATTTAAAAACTAACAAATGTCTTGCAATCTTTGCTCCTCTTGA
AGGAGGTTATGAAACTCGTCTTTTGAGGAGAATGAGGGCCAAGGGCTTTAAAACTTTTATAACCTCCGCAAGAGGGCTTG
GAGATCCAGAAGTCTTCTTGCTCAAATTGCATGGCGTGAGACCTCCGCACCTTGGTCATCAAAGCGTAGGAAGAAATGGA
GCGCTCGGGGAAGTTCAACAAGTAATCCCACAAGCTTCTGAGTTATTTAATGAAAATGATAAAAATAAATTACTTTGGTT
ATTAGAAGGTCAAGTATTGTCTCAGTCTGAATTAGAGAGCTTAATAGAGATTTGCACTAATGATAATAAACTATCAATAG
TTGTTGAAATGGGAGGTTCAAGAAAACTTGAATGGAAGCCATTAAGTAATTATATTTTAGATGAATTTGAAAGTTAA

Upstream 100 bases:

>100_bases
AGAGGCTCGGCTAGCTTGCGAGCTTAAAAATTCACTGAGTTACAATTGTACATCATCAAGTACCATAAAATAAAATAAAA
TAGAAATAAAGGAAATTTTT

Downstream 100 bases:

>100_bases
ATTGTTTGACTACAACCAAGAATAAAAAAGATAAATGGATTAAATTAATTTGTGGTGCCAGTAATGAAGATATTGTTGCC
ATAGAAGATTTATGTGCAAT

Product: NADH dehydrogenase I subunit N

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit N; NDH-1 subunit N; NDH-N [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MPLLLTGKQFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRPPHLGHQSVGRNG
ALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTNDNKLSIVVEMGGSRKLEWKPLSNYILDEFES

Sequences:

>Translated_158_residues
MPLLLTGKQFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRPPHLGHQSVGRNG
ALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTNDNKLSIVVEMGGSRKLEWKPLSNYILDEFES
>Mature_157_residues
PLLLTGKQFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRPPHLGHQSVGRNGA
LGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTNDNKLSIVVEMGGSRKLEWKPLSNYILDEFES

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhN subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020874 [H]

Pfam domain/function: PF11909 NdhN [H]

EC number: 1.6.5.3

Molecular weight: Translated: 17772; Mature: 17641

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLLTGKQFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFL
CCEEECCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
LKLHGVRPPHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELES
EEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH
LIEICTNDNKLSIVVEMGGSRKLEWKPLSNYILDEFES
HHHHHCCCCEEEEEEEECCCCEEECCCHHHHHHHHCCC
>Mature Secondary Structure 
PLLLTGKQFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFL
CEEECCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
LKLHGVRPPHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELES
EEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH
LIEICTNDNKLSIVVEMGGSRKLEWKPLSNYILDEFES
HHHHHCCCCEEEEEEEECCCCEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA