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The map label for this gene is rpmC

Identifier: 78780027

GI number: 78780027

Start: 1534207

End: 1534425

Strand: Reverse

Name: rpmC

Synonym: PMT9312_1642

Alternate gene names: 78780027

Gene position: 1534425-1534207 (Counterclockwise)

Preceding gene: 78780028

Following gene: 78780026

Centisome position: 89.77

GC content: 28.77

Gene sequence:

>219_bases
GTGAAAAACTCAGAGTCACTTAAAGAATTTAAAAAATTAAATTCTGCTCAAATTACTGAAAAGATTGACCAATTAAGAAA
AGATCTTTTTGATTTGAGATTCAAGCAAGCTACTAGACAGCTTAATGAAACTCATAAATTTAAAACCATTAAGAAACAAG
TTGCACAATTACTAACTCTCAGTAAGAGTCAATCTGCTTCTCAAACAACTTCTGAATAA

Upstream 100 bases:

>100_bases
TTCCTGTAAAGACAAAATTTATCTCGAGTGATAAAAATCTAGAAGTTTCTTCTCAAGAAAACACAAAAAATAATAAAGAA
TCTCAAGAGGAGGTTAAACA

Downstream 100 bases:

>100_bases
TTACTTAGTTATGGCACTTAAAGAAAGAATTGGAACTGTTGTCAGCGACAAGATGGATAAGACGGTTGTTGTTGCTGTTA
TTAACAGATATCCACATCCT

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MKNSESLKEFKKLNSAQITEKIDQLRKDLFDLRFKQATRQLNETHKFKTIKKQVAQLLTLSKSQSASQTTSE

Sequences:

>Translated_72_residues
MKNSESLKEFKKLNSAQITEKIDQLRKDLFDLRFKQATRQLNETHKFKTIKKQVAQLLTLSKSQSASQTTSE
>Mature_72_residues
MKNSESLKEFKKLNSAQITEKIDQLRKDLFDLRFKQATRQLNETHKFKTIKKQVAQLLTLSKSQSASQTTSE

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_PROM9 (Q318J2)

Other databases:

- EMBL:   CP000111
- RefSeq:   YP_398139.1
- ProteinModelPortal:   Q318J2
- SMR:   Q318J2
- STRING:   Q318J2
- GeneID:   3766462
- OMA:   LNETHKF
- ProtClustDB:   PRK00306
- BioCyc:   PMAR74546:PMT9312_1642-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8386; Mature: 8386

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSESLKEFKKLNSAQITEKIDQLRKDLFDLRFKQATRQLNETHKFKTIKKQVAQLLTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKSQSASQTTSE
HHCCCCCCCCCC
>Mature Secondary Structure
MKNSESLKEFKKLNSAQITEKIDQLRKDLFDLRFKQATRQLNETHKFKTIKKQVAQLLTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKSQSASQTTSE
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA