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The map label for this gene is arnC [H]

Identifier: 78779998

GI number: 78779998

Start: 1511295

End: 1512269

Strand: Reverse

Name: arnC [H]

Synonym: PMT9312_1614

Alternate gene names: 78779998

Gene position: 1512269-1511295 (Counterclockwise)

Preceding gene: 78779999

Following gene: 161350029

Centisome position: 88.48

GC content: 28.82

Gene sequence:

>975_bases
ATGTCAAATATAAACCAATTAATATCAATTATTATTCCTGTTTTCAATGAAAGTGAAAGTATTGGTTTTTTATTAGATGA
AGTTATAAGTGTAATGGCATCACATAAATTTGATTTTGAATTGATTGTTGTAAATGATGGGTCTAAAGACAATACTCATC
GAGTATTAAAACACTTAACTCACAAAATTCAGGAATTGTCAGTAATTTCTCTTCGTAAAAATTATGGACAAACTGCAGCA
ATGTCAGCTGGCTTTGATCACTCAAAAGGTAACATTGTAATTACATTGGATGGTGACTTACAGAATGACCCTAATGATAT
ACCTAAATTAATTTCAGAAATTAATAATGGCTATGATTTGATATGTGGTTGGAGGTTTGATAGAAAAGATAAATTAATTA
ATAGGAAGATACCATCAAAAATAGCAAATCAATTAATAGCTCAAGTAACAGGTTTGAAGTTGCATGATTATGGATGTTCA
TTAAAAGCTTTTAAAAAAGAAATAATTGATGATATTAAACTATATGGAGAACTGCACAGGTTTCTTCCAGTTTTAGCAAA
TATTGAAGGTGCAAAAATTAAGGAAATCAAGGTCAATCATAGAAGTCGTAAATATGGATCAAGTAAATATGGGATTGATA
GAACTTTTAGGGTGTTAATGGATTTACTAACTGTTTGGTTTATGACTAAATTTTTAACAAGACCTATGTATGGATTTGGT
TTTATTGGAATAATTAGTATTCTGATTAGTCTCTCAATGAGTTCTTATTTGTTAATTATAAAAATATTGGGAGAAGATAT
TGGGAATCGTCCGATGCTTATGTTTGCATTAATATTAGGAATTGCAGGGGTTCAATTATTTAGCTTTGGATTATTAAGTG
AGCTTTTAATTCGGACTTATCATGAGAGTCAAAACAGACCAATTTATAGAGTTAGAGAAATTGATGAAAGCAAGAAGAAT
GAAACTTTTACTTAA

Upstream 100 bases:

>100_bases
TTCTTAAATAATACAAATCACCACGAATGTGGTGATTTTTTTTGTTTAATTTTATTCTTCTAAATTAAGTTAAAATTATA
GGATTATTATCTAAATAAAT

Downstream 100 bases:

>100_bases
AGTTTCTAATTAAGTAAGCTGACTTTTCAACTATCTCTGGAGATGTATCTTTTAAACCTCTTCTAAGAATAGGCAATATT
GATTTATCAGCTAATTTCTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSNINQLISIIIPVFNESESIGFLLDEVISVMASHKFDFELIVVNDGSKDNTHRVLKHLTHKIQELSVISLRKNYGQTAA
MSAGFDHSKGNIVITLDGDLQNDPNDIPKLISEINNGYDLICGWRFDRKDKLINRKIPSKIANQLIAQVTGLKLHDYGCS
LKAFKKEIIDDIKLYGELHRFLPVLANIEGAKIKEIKVNHRSRKYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
FIGIISILISLSMSSYLLIIKILGEDIGNRPMLMFALILGIAGVQLFSFGLLSELLIRTYHESQNRPIYRVREIDESKKN
ETFT

Sequences:

>Translated_324_residues
MSNINQLISIIIPVFNESESIGFLLDEVISVMASHKFDFELIVVNDGSKDNTHRVLKHLTHKIQELSVISLRKNYGQTAA
MSAGFDHSKGNIVITLDGDLQNDPNDIPKLISEINNGYDLICGWRFDRKDKLINRKIPSKIANQLIAQVTGLKLHDYGCS
LKAFKKEIIDDIKLYGELHRFLPVLANIEGAKIKEIKVNHRSRKYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
FIGIISILISLSMSSYLLIIKILGEDIGNRPMLMFALILGIAGVQLFSFGLLSELLIRTYHESQNRPIYRVREIDESKKN
ETFT
>Mature_323_residues
SNINQLISIIIPVFNESESIGFLLDEVISVMASHKFDFELIVVNDGSKDNTHRVLKHLTHKIQELSVISLRKNYGQTAAM
SAGFDHSKGNIVITLDGDLQNDPNDIPKLISEINNGYDLICGWRFDRKDKLINRKIPSKIANQLIAQVTGLKLHDYGCSL
KAFKKEIIDDIKLYGELHRFLPVLANIEGAKIKEIKVNHRSRKYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFGF
IGIISILISLSMSSYLLIIKILGEDIGNRPMLMFALILGIAGVQLFSFGLLSELLIRTYHESQNRPIYRVREIDESKKNE
TFT

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=234, Percent_Identity=28.2051282051282, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI1788588, Length=319, Percent_Identity=34.7962382445141, Blast_Score=200, Evalue=1e-52,
Organism=Escherichia coli, GI1788692, Length=309, Percent_Identity=26.2135922330097, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1787259, Length=96, Percent_Identity=36.4583333333333, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24585265, Length=235, Percent_Identity=28.0851063829787, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36899; Mature: 36768

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNINQLISIIIPVFNESESIGFLLDEVISVMASHKFDFELIVVNDGSKDNTHRVLKHLT
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHH
HKIQELSVISLRKNYGQTAAMSAGFDHSKGNIVITLDGDLQNDPNDIPKLISEINNGYDL
HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEE
ICGWRFDRKDKLINRKIPSKIANQLIAQVTGLKLHDYGCSLKAFKKEIIDDIKLYGELHR
EEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
FLPVLANIEGAKIKEIKVNHRSRKYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
HHHHHHCCCCCEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FIGIISILISLSMSSYLLIIKILGEDIGNRPMLMFALILGIAGVQLFSFGLLSELLIRTY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HESQNRPIYRVREIDESKKNETFT
HHCCCCCEEEHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNINQLISIIIPVFNESESIGFLLDEVISVMASHKFDFELIVVNDGSKDNTHRVLKHLT
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHH
HKIQELSVISLRKNYGQTAAMSAGFDHSKGNIVITLDGDLQNDPNDIPKLISEINNGYDL
HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEE
ICGWRFDRKDKLINRKIPSKIANQLIAQVTGLKLHDYGCSLKAFKKEIIDDIKLYGELHR
EEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
FLPVLANIEGAKIKEIKVNHRSRKYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
HHHHHHCCCCCEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FIGIISILISLSMSSYLLIIKILGEDIGNRPMLMFALILGIAGVQLFSFGLLSELLIRTY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HESQNRPIYRVREIDESKKNETFT
HHCCCCCEEEHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA