Click here to switch to the map view.

The map label for this gene is res [H]

Identifier: 78779991

GI number: 78779991

Start: 1507488

End: 1508162

Strand: Direct

Name: res [H]

Synonym: PMT9312_1607

Alternate gene names: 78779991

Gene position: 1507488-1508162 (Clockwise)

Preceding gene: 78779989

Following gene: 78779992

Centisome position: 88.2

GC content: 26.67

Gene sequence:

>675_bases
GTGTTTTTTTATTTATTTATTGATACACTAAAAAATATATGTAAGAAAACATTGACTTTTAAATTCAAAAGAAAACGTCT
TTTACTATCTAAAAAAAATAAAAACTATAAAGCTATAGGATATGCTAGAGCTATTCATAATGAATTTGAATATTTAGAGG
AGCAAATAAAAAATTTAAAGGAAAAAGGTTGCAGTGAAGTATTCTCTGAATTTGTAAGTTTAGATGAAGAAATCAAACCC
CAACTAAATAAAGCTATAAATTGCTTATCTAAAGGAGATGAATTAATAATAACTAAGCTTGATCGAGCATTTAAAAATAA
AAAAGAATGTTTGATGACAATAAATAAACTCATTAATCAGGATATTAAATTGCGAACTCTGACTGGATTTTTTGCGGATT
ATGATTCCTCTAAAACAAATTCTTCAATTTTTAAGATTTTATATGAATTGGATAATTTAGAAGACAAAAGTTTAGGGGAA
AGAAAAAAAGAACAACTATTACGTAGAAAATTATCCGGGAATAATCTAGGAGGAAGGCCAAAGATCAGTCCTTTAAAAGA
ATCTCTAGTAATCAGATTACGTAATGAAGGATATTCATATCGATCAATAAGAGCACAAACAGGAATTGCATTGTCAACAA
TTAGGAGAGTAATTTTGGAAGGAGAATTAAACTAA

Upstream 100 bases:

>100_bases
CAGAATTTAGAACAGTCTTTTTAATACAGATATCAAAACAGTTTTATCATAGCCTATATCACTAGATTAGATCTATAATT
AATATTTTTTGTACTAAAAA

Downstream 100 bases:

>100_bases
AATGAGGAATAAAGAAATTGAAAACTTAATTAAAGAAAATTTCAAAGATACAGCATTGCGTATTTATGAATTAGATAATG
AAGATAGAAAAAGTTTGTTA

Product: site-specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MFFYLFIDTLKNICKKTLTFKFKRKRLLLSKKNKNYKAIGYARAIHNEFEYLEEQIKNLKEKGCSEVFSEFVSLDEEIKP
QLNKAINCLSKGDELIITKLDRAFKNKKECLMTINKLINQDIKLRTLTGFFADYDSSKTNSSIFKILYELDNLEDKSLGE
RKKEQLLRRKLSGNNLGGRPKISPLKESLVIRLRNEGYSYRSIRAQTGIALSTIRRVILEGELN

Sequences:

>Translated_224_residues
MFFYLFIDTLKNICKKTLTFKFKRKRLLLSKKNKNYKAIGYARAIHNEFEYLEEQIKNLKEKGCSEVFSEFVSLDEEIKP
QLNKAINCLSKGDELIITKLDRAFKNKKECLMTINKLINQDIKLRTLTGFFADYDSSKTNSSIFKILYELDNLEDKSLGE
RKKEQLLRRKLSGNNLGGRPKISPLKESLVIRLRNEGYSYRSIRAQTGIALSTIRRVILEGELN
>Mature_224_residues
MFFYLFIDTLKNICKKTLTFKFKRKRLLLSKKNKNYKAIGYARAIHNEFEYLEEQIKNLKEKGCSEVFSEFVSLDEEIKP
QLNKAINCLSKGDELIITKLDRAFKNKKECLMTINKLINQDIKLRTLTGFFADYDSSKTNSSIFKILYELDNLEDKSLGE
RKKEQLLRRKLSGNNLGGRPKISPLKESLVIRLRNEGYSYRSIRAQTGIALSTIRRVILEGELN

Specific function: A likely role for the res protein would be to stabilize pCP13 by reducing the number of plasmid multimers resulting from homologous recombination [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=180, Percent_Identity=27.2222222222222, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 26105; Mature: 26105

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFYLFIDTLKNICKKTLTFKFKRKRLLLSKKNKNYKAIGYARAIHNEFEYLEEQIKNLK
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EKGCSEVFSEFVSLDEEIKPQLNKAINCLSKGDELIITKLDRAFKNKKECLMTINKLINQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DIKLRTLTGFFADYDSSKTNSSIFKILYELDNLEDKSLGERKKEQLLRRKLSGNNLGGRP
CCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
KISPLKESLVIRLRNEGYSYRSIRAQTGIALSTIRRVILEGELN
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFFYLFIDTLKNICKKTLTFKFKRKRLLLSKKNKNYKAIGYARAIHNEFEYLEEQIKNLK
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EKGCSEVFSEFVSLDEEIKPQLNKAINCLSKGDELIITKLDRAFKNKKECLMTINKLINQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DIKLRTLTGFFADYDSSKTNSSIFKILYELDNLEDKSLGERKKEQLLRRKLSGNNLGGRP
CCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
KISPLKESLVIRLRNEGYSYRSIRAQTGIALSTIRRVILEGELN
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]