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The map label for this gene is 78779954

Identifier: 78779954

GI number: 78779954

Start: 1462689

End: 1463048

Strand: Reverse

Name: 78779954

Synonym: PMT9312_1570

Alternate gene names: NA

Gene position: 1463048-1462689 (Counterclockwise)

Preceding gene: 78779955

Following gene: 78779953

Centisome position: 85.6

GC content: 37.22

Gene sequence:

>360_bases
ATGGATTTTACTGATCCATTGGATAACGTTGCAGAGAATATCGAAATTACAGGCTGGGAGGCTGTTTTAGGCGGTCAGTT
AGCCGAAAAAGCTGTATGGGTTGATGAGGCTAAGTGTATTGGTTGTAAATATTGTGTACACGTTGCTTCAAACACTTTCA
TAGTTGATGAATTTCATGGTAGAAGTCGAGCTGTTAGACAAGACGGAGATAGTATTGATCTTATACAAGAAGCAATAGAT
ACATGTCCTGTTGATTGTATTAACTGGGTCAAGTTTGAAGAATTGGAAGATTTAGAGAATAGTCTCGATAGGGATATGTT
TCAATCATTTGGAAAACCCCCAAGAATGAATAAGCATTAA

Upstream 100 bases:

>100_bases
CAAAACAAAAGAGGATGGTTATCAAATTGTTGAACAAAAAAACAAAAATGACGGTTCTATTGAATTGGTTTTAACCAAGT
GGGATAACTAATGGCAGAGT

Downstream 100 bases:

>100_bases
TTTTAAAAATGGAATATCGTAGATTTGGTCGAACCAATCTGAAGATGCCTATTTTATCTTTGGGTGGTATGAGATTTCAA
AAAAGTTGGGATCAATTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: 3Fe-4S Ferredoxin; Ferredoxin-Like Protein; Ferredoxin 4Fe-4S Type; Ferrodoxin I

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MDFTDPLDNVAENIEITGWEAVLGGQLAEKAVWVDEAKCIGCKYCVHVASNTFIVDEFHGRSRAVRQDGDSIDLIQEAID
TCPVDCINWVKFEELEDLENSLDRDMFQSFGKPPRMNKH

Sequences:

>Translated_119_residues
MDFTDPLDNVAENIEITGWEAVLGGQLAEKAVWVDEAKCIGCKYCVHVASNTFIVDEFHGRSRAVRQDGDSIDLIQEAID
TCPVDCINWVKFEELEDLENSLDRDMFQSFGKPPRMNKH
>Mature_119_residues
MDFTDPLDNVAENIEITGWEAVLGGQLAEKAVWVDEAKCIGCKYCVHVASNTFIVDEFHGRSRAVRQDGDSIDLIQEAID
TCPVDCINWVKFEELEDLENSLDRDMFQSFGKPPRMNKH

Specific function: Unknown

COG id: COG1141

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13492; Mature: 13492

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTDPLDNVAENIEITGWEAVLGGQLAEKAVWVDEAKCIGCKYCVHVASNTFIVDEFHG
CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCC
RSRAVRQDGDSIDLIQEAIDTCPVDCINWVKFEELEDLENSLDRDMFQSFGKPPRMNKH
CHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDFTDPLDNVAENIEITGWEAVLGGQLAEKAVWVDEAKCIGCKYCVHVASNTFIVDEFHG
CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCC
RSRAVRQDGDSIDLIQEAIDTCPVDCINWVKFEELEDLENSLDRDMFQSFGKPPRMNKH
CHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA