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The map label for this gene is petF2 [H]

Identifier: 78779926

GI number: 78779926

Start: 1437895

End: 1438221

Strand: Reverse

Name: petF2 [H]

Synonym: PMT9312_1542

Alternate gene names: 78779926

Gene position: 1438221-1437895 (Counterclockwise)

Preceding gene: 78779927

Following gene: 78779925

Centisome position: 84.15

GC content: 32.42

Gene sequence:

>327_bases
ATGTCTGAATATAATATCAAAGTAAAATTTGGTGGAAAAACTTTTATGTTTTCATGTCCAGAAGATCAAGATATTATTTC
AGCGGCAAATATGAATGGGATAGATTTACCAAATAGTTGTTGTACAGGAGTTTGTACAAGTTGCGCATCCAGGATATTGG
AAGGAATTGTTGAGCAAGAAGATGCTATGGGATTAAATGATGATTTAAGAGAAAAAGGTTTTGCCCTTTTGTGTGTGGCA
TATCCTAAGTCAGATTTGCATGTCGTAATTGGTGATCAAGTTGAAGATGATTTATATAATGATCAATTTGGTAAGTATCA
AAAATGA

Upstream 100 bases:

>100_bases
TAAATCTAACCTATAATAAAGCTAGACAAGCTGCTATTACTCAAGAAATATTAGAGGTTGTAGGAGGCTCAGCTGTTTAA
CAGAAAAAATAATTTAGTAT

Downstream 100 bases:

>100_bases
AATTAAGTGAAGTTGATTTTTACATGGATTGGCCAGTTTCAATAGAAGTAAAAAATTTAAGGAAATTTATTTTTGCAAAT
TTAGAAAATAAAGGTAAAGT

Product: ferredoxin (2Fe-2S)

Products: NA

Alternate protein names: Ferredoxin II [H]

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSEYNIKVKFGGKTFMFSCPEDQDIISAANMNGIDLPNSCCTGVCTSCASRILEGIVEQEDAMGLNDDLREKGFALLCVA
YPKSDLHVVIGDQVEDDLYNDQFGKYQK

Sequences:

>Translated_108_residues
MSEYNIKVKFGGKTFMFSCPEDQDIISAANMNGIDLPNSCCTGVCTSCASRILEGIVEQEDAMGLNDDLREKGFALLCVA
YPKSDLHVVIGDQVEDDLYNDQFGKYQK
>Mature_107_residues
SEYNIKVKFGGKTFMFSCPEDQDIISAANMNGIDLPNSCCTGVCTSCASRILEGIVEQEDAMGLNDDLREKGFALLCVAY
PKSDLHVVIGDQVEDDLYNDQFGKYQK

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR010241
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 11928; Mature: 11796

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYNIKVKFGGKTFMFSCPEDQDIISAANMNGIDLPNSCCTGVCTSCASRILEGIVEQE
CCCEEEEEEECCEEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DAMGLNDDLREKGFALLCVAYPKSDLHVVIGDQVEDDLYNDQFGKYQK
HCCCCCHHHHCCCEEEEEEECCCCCEEEEECCCCCCHHCCCCCCCCCC
>Mature Secondary Structure 
SEYNIKVKFGGKTFMFSCPEDQDIISAANMNGIDLPNSCCTGVCTSCASRILEGIVEQE
CCEEEEEEECCEEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DAMGLNDDLREKGFALLCVAYPKSDLHVVIGDQVEDDLYNDQFGKYQK
HCCCCCHHHHCCCEEEEEEECCCCCEEEEECCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3041005; 2843173 [H]