Click here to switch to the map view.

The map label for this gene is 78779897

Identifier: 78779897

GI number: 78779897

Start: 1414818

End: 1415450

Strand: Direct

Name: 78779897

Synonym: PMT9312_1513

Alternate gene names: NA

Gene position: 1414818-1415450 (Clockwise)

Preceding gene: 78779890

Following gene: 78779900

Centisome position: 82.78

GC content: 36.49

Gene sequence:

>633_bases
ATGGAACTAATTGGGAAATATAAAAATTCAGGATTCGAAGCGGTAGCTGATGGTGTTATTTCTTTTTTTGATCGCCGTAA
AGACTTACATACTAATGGTATAGCTTTTGGTCAAAGCATCTCTTTGAATTCTGATCCTTACAAAGTTTCCACTGATATTA
GTCTTGTTTCTATAGATCGTTCAGATCCAGAAGCCTTTGCAATCTCTGAAGTTATAATTAGAGGAGTTAATGCTGCACTA
AAAAAATATCTAGAAGATCGGCCACTAGTGAAGGAATGTTGCCCAGAACAATCTTTATTTGTTAACCCAATATTTAATTT
ACAACGTTATGCTCCGGGAGAAGGATTTAAGAAATGGCATTGCGATTGGACTATTAGTAATGAATCTACAGAACCTGTAC
ACCGAGTATTAGCTTGGATTCTTTATTGTAATGATGTCACTTCTGGCGGGACTGAATTTCGTTGGCAGCAGCATCATGAA
GAAGCTGAAAGAGGAAAACTTATTATCTTTCCCGCAGGAATTTCTCATATTCATCGCGGTAGAGTCAATAATACTGATTT
TAAAACTATCGCAACCGGTTGGATAAATGCAGGTAATCTTGAAACCTATATTTCACGATTAGCGAACTCCTAA

Upstream 100 bases:

>100_bases
ACTGGGATTTCAAGGAATCGTAATTTTTTATCCAAACTTTATCCAAACTTTTAGCGATTGACAGTCGATCTAACATGGAG
GGGTAAAACCCTCTTTTTTT

Downstream 100 bases:

>100_bases
ACTTTTTCAAACCTATATTTTCACCGAGATCCCATGCCACAAAAGGAACCTAGCTACTGGCTAATATAAAAGTACACCCG
TCTAGCTATTACTGCGATCT

Product: trypsin-like

Products: NA

Alternate protein names: Trypsin; Prolyl 4-Hydroxylase Alpha Subunit; Mannitol Dehydrogenase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; 2og-Fe(Ii) Oxygenase; 2OG-Fe(II) Oxygenase Family; 2-Oxoglutarate-Fe(Ii) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily; 2OG-Fe(II) Oxygenase Family Protein; 2-Oxoglutarate-Fe(II) Oxygenase Family Protein; Dioxygenase

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MELIGKYKNSGFEAVADGVISFFDRRKDLHTNGIAFGQSISLNSDPYKVSTDISLVSIDRSDPEAFAISEVIIRGVNAAL
KKYLEDRPLVKECCPEQSLFVNPIFNLQRYAPGEGFKKWHCDWTISNESTEPVHRVLAWILYCNDVTSGGTEFRWQQHHE
EAERGKLIIFPAGISHIHRGRVNNTDFKTIATGWINAGNLETYISRLANS

Sequences:

>Translated_210_residues
MELIGKYKNSGFEAVADGVISFFDRRKDLHTNGIAFGQSISLNSDPYKVSTDISLVSIDRSDPEAFAISEVIIRGVNAAL
KKYLEDRPLVKECCPEQSLFVNPIFNLQRYAPGEGFKKWHCDWTISNESTEPVHRVLAWILYCNDVTSGGTEFRWQQHHE
EAERGKLIIFPAGISHIHRGRVNNTDFKTIATGWINAGNLETYISRLANS
>Mature_210_residues
MELIGKYKNSGFEAVADGVISFFDRRKDLHTNGIAFGQSISLNSDPYKVSTDISLVSIDRSDPEAFAISEVIIRGVNAAL
KKYLEDRPLVKECCPEQSLFVNPIFNLQRYAPGEGFKKWHCDWTISNESTEPVHRVLAWILYCNDVTSGGTEFRWQQHHE
EAERGKLIIFPAGISHIHRGRVNNTDFKTIATGWINAGNLETYISRLANS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23705; Mature: 23705

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIGKYKNSGFEAVADGVISFFDRRKDLHTNGIAFGQSISLNSDPYKVSTDISLVSIDR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCEECCCCCCEEEECCEEEEEECC
SDPEAFAISEVIIRGVNAALKKYLEDRPLVKECCPEQSLFVNPIFNLQRYAPGEGFKKWH
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECHHHHHHHCCCCCCCCEEE
CDWTISNESTEPVHRVLAWILYCNDVTSGGTEFRWQQHHEEAERGKLIIFPAGISHIHRG
EEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHCC
RVNNTDFKTIATGWINAGNLETYISRLANS
CCCCCCCCEEEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MELIGKYKNSGFEAVADGVISFFDRRKDLHTNGIAFGQSISLNSDPYKVSTDISLVSIDR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCEECCCCCCEEEECCEEEEEECC
SDPEAFAISEVIIRGVNAALKKYLEDRPLVKECCPEQSLFVNPIFNLQRYAPGEGFKKWH
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECHHHHHHHCCCCCCCCEEE
CDWTISNESTEPVHRVLAWILYCNDVTSGGTEFRWQQHHEEAERGKLIIFPAGISHIHRG
EEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHCC
RVNNTDFKTIATGWINAGNLETYISRLANS
CCCCCCCCEEEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA