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The map label for this gene is 78779892

Identifier: 78779892

GI number: 78779892

Start: 1412006

End: 1412134

Strand: Reverse

Name: 78779892

Synonym: PMT9312_1508

Alternate gene names: NA

Gene position: 1412134-1412006 (Counterclockwise)

Preceding gene: 78779893

Following gene: 78779891

Centisome position: 82.62

GC content: 37.98

Gene sequence:

>129_bases
ATGGACAAATCACAACCTAACTATTGGCAAAATGCTGAAATGACTAATGGAAGGATGGCAATGATGGGCTTCTTCGCATT
AGTAGTAAACTACGGTCTTTTTGGCTGGATCATACCAGGTATTTTTTAA

Upstream 100 bases:

>100_bases
TGCTCGGTCTTATGGCTGCTATTGGTGCATATCTAACTACTGGACAAATTATTCCTGGTTTCGTTTAGCCAAAAAATTCA
AACAATTCACTTTAAATCAA

Downstream 100 bases:

>100_bases
AATGAACGTAGACATTTTCTTAATCTCTTTCTTTATATATCTATTAGTGCCAGTGGTAATGATAGCTAAAGGGAAAAAAG
CAACTAACTAAAAAATATGA

Product: high light inducible protein-like

Products: NA

Alternate protein names: High Light Inducible Protein-Like

Number of amino acids: Translated: 42; Mature: 42

Protein sequence:

>42_residues
MDKSQPNYWQNAEMTNGRMAMMGFFALVVNYGLFGWIIPGIF

Sequences:

>Translated_42_residues
MDKSQPNYWQNAEMTNGRMAMMGFFALVVNYGLFGWIIPGIF
>Mature_42_residues
MDKSQPNYWQNAEMTNGRMAMMGFFALVVNYGLFGWIIPGIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4848; Mature: 4848

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
11.9 %Met     (Translated Protein)
11.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
11.9 %Met     (Mature Protein)
11.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSQPNYWQNAEMTNGRMAMMGFFALVVNYGLFGWIIPGIF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDKSQPNYWQNAEMTNGRMAMMGFFALVVNYGLFGWIIPGIF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA