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The map label for this gene is 78779861

Identifier: 78779861

GI number: 78779861

Start: 1387156

End: 1387779

Strand: Reverse

Name: 78779861

Synonym: PMT9312_1477

Alternate gene names: NA

Gene position: 1387779-1387156 (Counterclockwise)

Preceding gene: 78779862

Following gene: 78779855

Centisome position: 81.19

GC content: 30.77

Gene sequence:

>624_bases
TTGGATAATAGACTTTTTTTCTCGGCGACTCAAAGAAATAGAGACTGCATTGGAGATGTATTATCCCAAATCATAAAAAA
GAATGGTTCAATATTGGAAATTGGTAGTGGCAGTGGTGAGCATGGAGTGGTCTTTCAAAAACGCTTTCCTAAAATAATTT
GGCAAACAAGTGATCCAAATTTACTACATAGAGAAAGTATAATTTCTTGGATTGAGTATGAAGAATTAGATAAGAAAATG
CCCCAACCTCTTGATCTTGATGTAAAAAAAACTCCTTGGAAATTACCACTAAAATTAGCAAATTCTTTACAAGGTATAGT
TTCTATAAATATGATTCATGTAGCAGAATGGAATTGTACTATAGAGCTCTTTAAGGGTGCAGGAAAATTACTTAAGAAGG
GACAATTTTTGTTATTGTATGGCCCATTTAAAATTGGTAATAAGCATACAAGTCAAAGTAATTATTTTTTCGATAATTCA
ATAAAAACGACAAATGATCTTTGGGGGATTAGAAATCTCGAGGAAGTTTGTGACGAAGCTAAATACAATGGTTTTTTTCA
AGAAAATATTATGAGGATGCCGGCAAATAATTTTTCAATAATTTATAAAAAAGTTTCTTGTTAA

Upstream 100 bases:

>100_bases
GCCTTAAAATAATGTTTTTTAAGACTCCAAAATTGAGAAAAGTGAAGTAAAGAGGATCTCAGAATAATTATTTCTACTAT
ATTTTCCCATTTTTATAATT

Downstream 100 bases:

>100_bases
ATAAAATTTATTATTAATGAATAATGAGATAGTATTTTATTAATTCATCAACTTGATAGCTTTCTGCTCCATTCTTTATG
CTTTTCATCTAAATCTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MDNRLFFSATQRNRDCIGDVLSQIIKKNGSILEIGSGSGEHGVVFQKRFPKIIWQTSDPNLLHRESIISWIEYEELDKKM
PQPLDLDVKKTPWKLPLKLANSLQGIVSINMIHVAEWNCTIELFKGAGKLLKKGQFLLLYGPFKIGNKHTSQSNYFFDNS
IKTTNDLWGIRNLEEVCDEAKYNGFFQENIMRMPANNFSIIYKKVSC

Sequences:

>Translated_207_residues
MDNRLFFSATQRNRDCIGDVLSQIIKKNGSILEIGSGSGEHGVVFQKRFPKIIWQTSDPNLLHRESIISWIEYEELDKKM
PQPLDLDVKKTPWKLPLKLANSLQGIVSINMIHVAEWNCTIELFKGAGKLLKKGQFLLLYGPFKIGNKHTSQSNYFFDNS
IKTTNDLWGIRNLEEVCDEAKYNGFFQENIMRMPANNFSIIYKKVSC
>Mature_207_residues
MDNRLFFSATQRNRDCIGDVLSQIIKKNGSILEIGSGSGEHGVVFQKRFPKIIWQTSDPNLLHRESIISWIEYEELDKKM
PQPLDLDVKKTPWKLPLKLANSLQGIVSINMIHVAEWNCTIELFKGAGKLLKKGQFLLLYGPFKIGNKHTSQSNYFFDNS
IKTTNDLWGIRNLEEVCDEAKYNGFFQENIMRMPANNFSIIYKKVSC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI93102387, Length=203, Percent_Identity=36.4532019704434, Blast_Score=123, Evalue=1e-28,
Organism=Homo sapiens, GI93102391, Length=145, Percent_Identity=35.8620689655172, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71998087, Length=200, Percent_Identity=27, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI28574095, Length=204, Percent_Identity=32.3529411764706, Blast_Score=105, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23820; Mature: 23820

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRLFFSATQRNRDCIGDVLSQIIKKNGSILEIGSGSGEHGVVFQKRFPKIIWQTSDPN
CCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCEEEEECCCCC
LLHRESIISWIEYEELDKKMPQPLDLDVKKTPWKLPLKLANSLQGIVSINMIHVAEWNCT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEEECCEE
IELFKGAGKLLKKGQFLLLYGPFKIGNKHTSQSNYFFDNSIKTTNDLWGIRNLEEVCDEA
EEEHHHHHHHHHCCCEEEEECCEECCCCCCCCCCEEECCCCCCCHHHHCCCCHHHHHHHH
KYNGFFQENIMRMPANNFSIIYKKVSC
HCCCCHHHHHHHCCCCCEEEEEEEECC
>Mature Secondary Structure
MDNRLFFSATQRNRDCIGDVLSQIIKKNGSILEIGSGSGEHGVVFQKRFPKIIWQTSDPN
CCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCEEEEECCCCC
LLHRESIISWIEYEELDKKMPQPLDLDVKKTPWKLPLKLANSLQGIVSINMIHVAEWNCT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEEECCEE
IELFKGAGKLLKKGQFLLLYGPFKIGNKHTSQSNYFFDNSIKTTNDLWGIRNLEEVCDEA
EEEHHHHHHHHHCCCEEEEECCEECCCCCCCCCCEEECCCCCCCHHHHCCCCHHHHHHHH
KYNGFFQENIMRMPANNFSIIYKKVSC
HCCCCHHHHHHHCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA