Click here to switch to the map view.

The map label for this gene is 78779839

Identifier: 78779839

GI number: 78779839

Start: 1366521

End: 1367138

Strand: Direct

Name: 78779839

Synonym: PMT9312_1455

Alternate gene names: NA

Gene position: 1366521-1367138 (Clockwise)

Preceding gene: 78779838

Following gene: 78779840

Centisome position: 79.95

GC content: 28.48

Gene sequence:

>618_bases
ATGAAACTTAATCAAATAATTAATCTTCATAAGGGGCTCACAGCATTTGTAGTTATAGGTCTTATGATTTTTTTTGATAA
TTTTACAATCGCTCCCTACGTTTATTTAGCTCTGCATGGTACTTATGGATTACTTTGGCTTCTAAAAGAAAAGATATTCC
CGGATCCTTATTTTAAAGAAAAAATCAATTTTTTAACTTCAGTCACTGGTTTTATTTTCCTTGGAAGTTACTGGGTAGCG
CCATACATTCTTATTTCATCTCAGAAATCTGTTCCGAATATCGTAATAGCTGCATCTGTATCTATAAATATAATTGGTGT
GTTTTTACACTTTGCTAGTGATGCTCAAAAATATTTTTCTCTTAAATTAAAAAAAGACCTAATTAAAGAAGGATTTTTCA
AAAATATAAGGAATACAAATTATCTAGGAGAAATACTAATTTATCTATCCTTCGTAATCCTTTCAATGAGTTTCATTCCA
TTAGTAATTCTTGCAATATTTTTCTTTATAGTTTTTCTGCCAAGAATGATAAAAAAAGATAAGTCGCTCTCAAAGTATGA
TTCATTCAAAGAATACAAAAAGAAAAGTGGTCTTATTTTGCCTAAATTAAATGCTTGA

Upstream 100 bases:

>100_bases
GTAGTGGCCACTGGTTCGAATCCAGTATCGCCCATTAAAACTTTGACGAACTAGCTTATATCCACATAAAATAATTTCAT
TTTTTAGATTATTAAAAAAG

Downstream 100 bases:

>100_bases
TAACAACTTACCAAGTTGGAGACAAGATTTAAAATCTTCTAGGAAAAAAGAGGGTAAATCACCCTCTAATAAATGGATAC
AGCTTGCAACAGTTAGCGAA

Product: steroid 5-alpha reductase-like

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKLNQIINLHKGLTAFVVIGLMIFFDNFTIAPYVYLALHGTYGLLWLLKEKIFPDPYFKEKINFLTSVTGFIFLGSYWVA
PYILISSQKSVPNIVIAASVSINIIGVFLHFASDAQKYFSLKLKKDLIKEGFFKNIRNTNYLGEILIYLSFVILSMSFIP
LVILAIFFFIVFLPRMIKKDKSLSKYDSFKEYKKKSGLILPKLNA

Sequences:

>Translated_205_residues
MKLNQIINLHKGLTAFVVIGLMIFFDNFTIAPYVYLALHGTYGLLWLLKEKIFPDPYFKEKINFLTSVTGFIFLGSYWVA
PYILISSQKSVPNIVIAASVSINIIGVFLHFASDAQKYFSLKLKKDLIKEGFFKNIRNTNYLGEILIYLSFVILSMSFIP
LVILAIFFFIVFLPRMIKKDKSLSKYDSFKEYKKKSGLILPKLNA
>Mature_205_residues
MKLNQIINLHKGLTAFVVIGLMIFFDNFTIAPYVYLALHGTYGLLWLLKEKIFPDPYFKEKINFLTSVTGFIFLGSYWVA
PYILISSQKSVPNIVIAASVSINIIGVFLHFASDAQKYFSLKLKKDLIKEGFFKNIRNTNYLGEILIYLSFVILSMSFIP
LVILAIFFFIVFLPRMIKKDKSLSKYDSFKEYKKKSGLILPKLNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23565; Mature: 23565

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50244 S5A_REDUCTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNQIINLHKGLTAFVVIGLMIFFDNFTIAPYVYLALHGTYGLLWLLKEKIFPDPYFKE
CCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
KINFLTSVTGFIFLGSYWVAPYILISSQKSVPNIVIAASVSINIIGVFLHFASDAQKYFS
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
LKLKKDLIKEGFFKNIRNTNYLGEILIYLSFVILSMSFIPLVILAIFFFIVFLPRMIKKD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KSLSKYDSFKEYKKKSGLILPKLNA
CCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKLNQIINLHKGLTAFVVIGLMIFFDNFTIAPYVYLALHGTYGLLWLLKEKIFPDPYFKE
CCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
KINFLTSVTGFIFLGSYWVAPYILISSQKSVPNIVIAASVSINIIGVFLHFASDAQKYFS
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
LKLKKDLIKEGFFKNIRNTNYLGEILIYLSFVILSMSFIPLVILAIFFFIVFLPRMIKKD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KSLSKYDSFKEYKKKSGLILPKLNA
CCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA