Click here to switch to the map view.

The map label for this gene is petF1 [H]

Identifier: 78779834

GI number: 78779834

Start: 1361924

End: 1362223

Strand: Reverse

Name: petF1 [H]

Synonym: PMT9312_1450

Alternate gene names: 78779834

Gene position: 1362223-1361924 (Counterclockwise)

Preceding gene: 78779835

Following gene: 78779833

Centisome position: 79.7

GC content: 40.33

Gene sequence:

>300_bases
ATGGCTTCTTACAAAGTTACACTCATCAGCGAAGGTGAAGGACTAAATTCAACCATCGAAGTACCTGATGATCAATATAT
TCTAGATGCTGCTGAAGAGCAAGGCATTGATCTACCATATTCTTGTAGAGCTGGAGCTTGTTCAACATGTGCAGGCAAGG
TTACTTCAGGGAGTGTTGATCAATCAGATCAGAGCTTCTTGGATGATGATCAACTTGAAGCTGGTTTTGTCCTTACTTGT
GTAGCTTATCCAACCTCTGATGTGACAATTACAACTCATGCTGAGGAAGAATTGTATTAA

Upstream 100 bases:

>100_bases
TTTATTGTGTCATTTTTTACGTCAAAATCCCCCATATCGACCTAATCAATGTTAAAAATGTATTTATATAGGTATTAACT
ACCAACATTTTTTTATTTAA

Downstream 100 bases:

>100_bases
TTATAAAAAATTAACTTTTTAAAGTTGATATTTTATTACTTCTCTGCCACCCTCTAGAAAGGTGGCTTTTTTTTTGGGAA
ATGAATAACTTTGAATTTTT

Product: ferredoxin (2Fe-2S)

Products: NA

Alternate protein names: Ferredoxin I; FdI [H]

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MASYKVTLISEGEGLNSTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKVTSGSVDQSDQSFLDDDQLEAGFVLTC
VAYPTSDVTITTHAEEELY

Sequences:

>Translated_99_residues
MASYKVTLISEGEGLNSTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKVTSGSVDQSDQSFLDDDQLEAGFVLTC
VAYPTSDVTITTHAEEELY
>Mature_98_residues
ASYKVTLISEGEGLNSTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKVTSGSVDQSDQSFLDDDQLEAGFVLTCV
AYPTSDVTITTHAEEELY

Specific function: Principal electron carrier in NADP-photoreduction [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787658, Length=87, Percent_Identity=45.9770114942529, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR010241
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 10566; Mature: 10434

Theoretical pI: Translated: 3.49; Mature: 3.49

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYKVTLISEGEGLNSTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKVTSGSVD
CCCEEEEEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSDQSFLDDDQLEAGFVLTCVAYPTSDVTITTHAEEELY
CCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCC
>Mature Secondary Structure 
ASYKVTLISEGEGLNSTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKVTSGSVD
CCEEEEEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSDQSFLDDDQLEAGFVLTCVAYPTSDVTITTHAEEELY
CCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA