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The map label for this gene is spoIID [H]

Identifier: 78779830

GI number: 78779830

Start: 1358631

End: 1359806

Strand: Reverse

Name: spoIID [H]

Synonym: PMT9312_1446

Alternate gene names: 78779830

Gene position: 1359806-1358631 (Counterclockwise)

Preceding gene: 78779833

Following gene: 78779828

Centisome position: 79.56

GC content: 28.23

Gene sequence:

>1176_bases
GTGATACTTAAATTAAATAAAATCTTTTGTAAATCGTGTTTGATTAGTATTTTATTTTTTTGTACTTTTCAGAGTGAAAC
CGTTTTTGCATCTTACGAGCCAAAAATAAGGGTTTTGATTTTAAAAAATAAGAACATAAGGATTAGATCAGATAAATCAA
TACCTTTAATCATAGATGGAAAAATTTTCTCAAATAAAAAAATAAAAGGTTTAACTTTGAAAAATGAGAAAAATAGAAGA
ATTTTGTATTTTGATAAGAATAAACAAAAAAAATATAATTTAAAAAGTAATCAAAAATTTCAACTTAGATCTTCTGATAG
AAGAGGAATTTGGGTAGGTCAAAAAAGATTCTCAGGTAAAATTAATCTCTTTGTGCTGGATTCTGAAATATTGGTAGTGA
ATGTTTTGGGCATTGAAAAATACTTAAGCAGTGTGGTGGGATCAGAGATGCCAGCAAAATGGCCTATGGAAGCATTAAAA
GCACAAGCAATTGCTTCAAGAACTTATGCTTTAAAGCAAAAGGGAAATAATTTATTTGACATAGATTCTACCCAGAGAAA
TCAAGTTTATAATGGTTTGGAGTCAAGAACTTACAAAACTATCAGAGCTGTTAAAAGTACAAGATCTTTGGTTTTGACAT
ATAAAAATAAATTAATTAATGCTTTGTTTCATAGCAGCTCAGGGGGAATGACAGAAAATAGTCAAGATGTATGGAAGAAT
AAATATCCATATTTAACAAGTGTGAAAGATTTTGATAAAAAGAACCCAAAATTTAGATGGCAAAAAAAATTTTCAAACAA
AGAATTAACAAATTTATTTCCCAAGATTGGAGGTATAAAAAATATAGAGATTCTAGATATTACTAGTACAGGCAGGGTAA
AAAATGTAAAACTTTTTGGAGCTTATGGTTCTGATCAAATGTCTGGTGTAGATTTAAGAAAAAAATTAGGACTTAATAGT
AATTTCGTAAGATTTAAATTTTTTGAGGAAGAACTAAATAATAAATTCCCTATGAAAAAAGGTTTAATAGTTTTAGGACA
GGGATCTGGACACGGAGTAGGAATGAGTCAGTGGGGTTCTAAATATATGGCATCTAAAGGCCAAAAAGCTGAAAAAATAT
TAAAGCATTACTACAGGGGTGTGCAGATTAAACCTTTTAAAAAAGATTATCTATAA

Upstream 100 bases:

>100_bases
GGTGATATTCACTTATTATGATATTTTTATTTTTATATCTGGATTAAATCTAGACTTTTAGTCAAACTTAGGCAAATTAA
GAATTTGTTTTTCAAACAAA

Downstream 100 bases:

>100_bases
AAATTATTTTGCATTAAGGACTAATTTTGGGTTTATATTAGTTAGTTCTTTATTTAAGAAGCCAATCCCGAGTAGCATTT
TTCTTTTATCTACTACCTTT

Product: sporulation protein SpoIID-like

Products: NA

Alternate protein names: Stage II sporulation protein C [H]

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MILKLNKIFCKSCLISILFFCTFQSETVFASYEPKIRVLILKNKNIRIRSDKSIPLIIDGKIFSNKKIKGLTLKNEKNRR
ILYFDKNKQKKYNLKSNQKFQLRSSDRRGIWVGQKRFSGKINLFVLDSEILVVNVLGIEKYLSSVVGSEMPAKWPMEALK
AQAIASRTYALKQKGNNLFDIDSTQRNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
KYPYLTSVKDFDKKNPKFRWQKKFSNKELTNLFPKIGGIKNIEILDITSTGRVKNVKLFGAYGSDQMSGVDLRKKLGLNS
NFVRFKFFEEELNNKFPMKKGLIVLGQGSGHGVGMSQWGSKYMASKGQKAEKILKHYYRGVQIKPFKKDYL

Sequences:

>Translated_391_residues
MILKLNKIFCKSCLISILFFCTFQSETVFASYEPKIRVLILKNKNIRIRSDKSIPLIIDGKIFSNKKIKGLTLKNEKNRR
ILYFDKNKQKKYNLKSNQKFQLRSSDRRGIWVGQKRFSGKINLFVLDSEILVVNVLGIEKYLSSVVGSEMPAKWPMEALK
AQAIASRTYALKQKGNNLFDIDSTQRNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
KYPYLTSVKDFDKKNPKFRWQKKFSNKELTNLFPKIGGIKNIEILDITSTGRVKNVKLFGAYGSDQMSGVDLRKKLGLNS
NFVRFKFFEEELNNKFPMKKGLIVLGQGSGHGVGMSQWGSKYMASKGQKAEKILKHYYRGVQIKPFKKDYL
>Mature_391_residues
MILKLNKIFCKSCLISILFFCTFQSETVFASYEPKIRVLILKNKNIRIRSDKSIPLIIDGKIFSNKKIKGLTLKNEKNRR
ILYFDKNKQKKYNLKSNQKFQLRSSDRRGIWVGQKRFSGKINLFVLDSEILVVNVLGIEKYLSSVVGSEMPAKWPMEALK
AQAIASRTYALKQKGNNLFDIDSTQRNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
KYPYLTSVKDFDKKNPKFRWQKKFSNKELTNLFPKIGGIKNIEILDITSTGRVKNVKLFGAYGSDQMSGVDLRKKLGLNS
NFVRFKFFEEELNNKFPMKKGLIVLGQGSGHGVGMSQWGSKYMASKGQKAEKILKHYYRGVQIKPFKKDYL

Specific function: May act at the level of sigma-G activity or its stability. SpoIID is probably required for engulfment [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693
- InterPro:   IPR014225 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 45039; Mature: 45039

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKLNKIFCKSCLISILFFCTFQSETVFASYEPKIRVLILKNKNIRIRSDKSIPLIIDG
CEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEECCCCCEEEECC
KIFSNKKIKGLTLKNEKNRRILYFDKNKQKKYNLKSNQKFQLRSSDRRGIWVGQKRFSGK
EEECCCCEEEEEEECCCCCEEEEEECCCCEECCCCCCCEEEEECCCCCCEEEECCCCCCE
INLFVLDSEILVVNVLGIEKYLSSVVGSEMPAKWPMEALKAQAIASRTYALKQKGNNLFD
EEEEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
IDSTQRNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHC
KYPYLTSVKDFDKKNPKFRWQKKFSNKELTNLFPKIGGIKNIEILDITSTGRVKNVKLFG
CCCCCCCCHHHCCCCCCEEEHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEE
AYGSDQMSGVDLRKKLGLNSNFVRFKFFEEELNNKFPMKKGLIVLGQGSGHGVGMSQWGS
ECCCCCCCCCHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEECCCCCCCCHHHHCC
KYMASKGQKAEKILKHYYRGVQIKPFKKDYL
HHHHCCCHHHHHHHHHHHCCCEEECCHHCCC
>Mature Secondary Structure
MILKLNKIFCKSCLISILFFCTFQSETVFASYEPKIRVLILKNKNIRIRSDKSIPLIIDG
CEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEECCCCCEEEECC
KIFSNKKIKGLTLKNEKNRRILYFDKNKQKKYNLKSNQKFQLRSSDRRGIWVGQKRFSGK
EEECCCCEEEEEEECCCCCEEEEEECCCCEECCCCCCCEEEEECCCCCCEEEECCCCCCE
INLFVLDSEILVVNVLGIEKYLSSVVGSEMPAKWPMEALKAQAIASRTYALKQKGNNLFD
EEEEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
IDSTQRNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHC
KYPYLTSVKDFDKKNPKFRWQKKFSNKELTNLFPKIGGIKNIEILDITSTGRVKNVKLFG
CCCCCCCCHHHCCCCCCEEEHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEE
AYGSDQMSGVDLRKKLGLNSNFVRFKFFEEELNNKFPMKKGLIVLGQGSGHGVGMSQWGS
ECCCCCCCCCHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEECCCCCCCCHHHHCC
KYMASKGQKAEKILKHYYRGVQIKPFKKDYL
HHHHCCCHHHHHHHHHHHCCCEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3011962; 9384377 [H]