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The map label for this gene is 78779828

Identifier: 78779828

GI number: 78779828

Start: 1356886

End: 1357560

Strand: Reverse

Name: 78779828

Synonym: PMT9312_1444

Alternate gene names: NA

Gene position: 1357560-1356886 (Counterclockwise)

Preceding gene: 78779830

Following gene: 78779825

Centisome position: 79.43

GC content: 31.56

Gene sequence:

>675_bases
ATGGAATTCTTATCTATTAAAGAATGTGATTTAGATGAATTTCTTGCAAATGCAAAGATGAATTTGGCAAATTTACATCC
TGGAGATGCTCTAAGTGATGTTTCAGATTTTTATACTGATATTGTTGGAGATCGCCATGTTGCTGATCTTGCTGCTTGGC
ATATGACAAGCAAGAATTACATCGCAGATACTTTAAAACTTCAGCATAGATTTTCTAGAGATTTAGTTTTAGATTTTGGA
GGAGGGATTGGAACACATGCCTTAGCTAATGCTATGTCTTCAAAAGTTGAGCATGTTTTTTTTGTAGATATTAATGAAAC
AAATAGACGCTTTGTTGAATACAGGGCTAAGGAATTAGGAGTCGAAAAAAAGCTTACTTTTTGCAAGACAATTGAGGATG
CACAAATATCAAAATTTGATACGATAGTTTGTCTTGATGTTTTGGAACATCTTGAAGATCCATCTTCTCAAATTGAGATT
TTCAATGAGTTTATGGATTGTAATTCTATTGCTTTATTCAATTGGTATTTCTATAAAGGAGAAAACGATGAATATCCATT
CCATATCGACGATAGACAAATCGTTGAAAAGTTCTTTAAGACACTTCAATCAAACTTTTTAGAAGTTTTTCATCCTATTC
TCATAACTACAAGAGCTTATCAGAAAATTAAATAA

Upstream 100 bases:

>100_bases
ATGATTTTTAATATCGGAAATTAAAAGTAAGAAATTGAAAAATAATAGTTCTATATTAAAAGAGTTTTTAGATAATGCTT
TCAATCTGAAATCACATTTA

Downstream 100 bases:

>100_bases
CTACATTAACTCTTTTTCTATTCCTTAGATTTCTTTTAATGCTTTCGAAACTTACGGTTCCTTCTTTGAGTGCAAAAAGC
GTGTCATCTTTTCCTTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MEFLSIKECDLDEFLANAKMNLANLHPGDALSDVSDFYTDIVGDRHVADLAAWHMTSKNYIADTLKLQHRFSRDLVLDFG
GGIGTHALANAMSSKVEHVFFVDINETNRRFVEYRAKELGVEKKLTFCKTIEDAQISKFDTIVCLDVLEHLEDPSSQIEI
FNEFMDCNSIALFNWYFYKGENDEYPFHIDDRQIVEKFFKTLQSNFLEVFHPILITTRAYQKIK

Sequences:

>Translated_224_residues
MEFLSIKECDLDEFLANAKMNLANLHPGDALSDVSDFYTDIVGDRHVADLAAWHMTSKNYIADTLKLQHRFSRDLVLDFG
GGIGTHALANAMSSKVEHVFFVDINETNRRFVEYRAKELGVEKKLTFCKTIEDAQISKFDTIVCLDVLEHLEDPSSQIEI
FNEFMDCNSIALFNWYFYKGENDEYPFHIDDRQIVEKFFKTLQSNFLEVFHPILITTRAYQKIK
>Mature_224_residues
MEFLSIKECDLDEFLANAKMNLANLHPGDALSDVSDFYTDIVGDRHVADLAAWHMTSKNYIADTLKLQHRFSRDLVLDFG
GGIGTHALANAMSSKVEHVFFVDINETNRRFVEYRAKELGVEKKLTFCKTIEDAQISKFDTIVCLDVLEHLEDPSSQIEI
FNEFMDCNSIALFNWYFYKGENDEYPFHIDDRQIVEKFFKTLQSNFLEVFHPILITTRAYQKIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25983; Mature: 25983

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLSIKECDLDEFLANAKMNLANLHPGDALSDVSDFYTDIVGDRHVADLAAWHMTSKNY
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
IADTLKLQHRFSRDLVLDFGGGIGTHALANAMSSKVEHVFFVDINETNRRFVEYRAKELG
HHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHC
VEKKLTFCKTIEDAQISKFDTIVCLDVLEHLEDPSSQIEIFNEFMDCNSIALFNWYFYKG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEEEC
ENDEYPFHIDDRQIVEKFFKTLQSNFLEVFHPILITTRAYQKIK
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEFLSIKECDLDEFLANAKMNLANLHPGDALSDVSDFYTDIVGDRHVADLAAWHMTSKNY
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
IADTLKLQHRFSRDLVLDFGGGIGTHALANAMSSKVEHVFFVDINETNRRFVEYRAKELG
HHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHC
VEKKLTFCKTIEDAQISKFDTIVCLDVLEHLEDPSSQIEIFNEFMDCNSIALFNWYFYKG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEEEC
ENDEYPFHIDDRQIVEKFFKTLQSNFLEVFHPILITTRAYQKIK
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA