Click here to switch to the map view.

The map label for this gene is 78779787

Identifier: 78779787

GI number: 78779787

Start: 1320252

End: 1320662

Strand: Direct

Name: 78779787

Synonym: PMT9312_1403

Alternate gene names: NA

Gene position: 1320252-1320662 (Clockwise)

Preceding gene: 78779786

Following gene: 78779788

Centisome position: 77.24

GC content: 36.98

Gene sequence:

>411_bases
ATGTTGCATGGACTTCTTTGGTTACCATTACTTTTAATCTTCGTTTTATTAACTGCACTTGGATGGTTAGAGAGAAGAAG
GCAAAATCTTTTTAGGAGCTGGGCAAATGGGTCTGAACTTTGTAAGTTAGATAGTTCAGGTGCAGCATTTTTAAAAGATG
GGAAATTAAGATGGAGCGCGTTTGAAGCTGGTAAATTTGAAGAAAAAGATTGTTTCACAATCAAGAAACTTGAATTAGTT
GAATTAATGGCACTAACTTCTGGAGAAGCTCCTCTAACAATTGAATCTCAAGGAAAGTGTAGGTTGAGACTAGTAGGTGA
TGGGAAAGAAATGGATGTACCATTTTCAGATGCAGAGCAGGCAAGAAAATGGATGGACCAATTGATGGAAAAAGCTAGAT
GTGATTTGTGA

Upstream 100 bases:

>100_bases
AAAAGTATGTTTCCAATGCTCTGGGAAGCTTCGGGTTTAAATATTGAACAACTTGTGGCTAAACTAGTAGATATATCTCT
AGATTTATAATTCAAATCAA

Downstream 100 bases:

>100_bases
AAAACCTAAAAAAAATAAACACTAGAAGCTTTTTATTTTTAATTTTATTTTTATTTTCAACAAGTTTTTTGAGCCTAAAA
AAATTTAAGAAGGTTAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLHGLLWLPLLLIFVLLTALGWLERRRQNLFRSWANGSELCKLDSSGAAFLKDGKLRWSAFEAGKFEEKDCFTIKKLELV
ELMALTSGEAPLTIESQGKCRLRLVGDGKEMDVPFSDAEQARKWMDQLMEKARCDL

Sequences:

>Translated_136_residues
MLHGLLWLPLLLIFVLLTALGWLERRRQNLFRSWANGSELCKLDSSGAAFLKDGKLRWSAFEAGKFEEKDCFTIKKLELV
ELMALTSGEAPLTIESQGKCRLRLVGDGKEMDVPFSDAEQARKWMDQLMEKARCDL
>Mature_136_residues
MLHGLLWLPLLLIFVLLTALGWLERRRQNLFRSWANGSELCKLDSSGAAFLKDGKLRWSAFEAGKFEEKDCFTIKKLELV
ELMALTSGEAPLTIESQGKCRLRLVGDGKEMDVPFSDAEQARKWMDQLMEKARCDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15521; Mature: 15521

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHGLLWLPLLLIFVLLTALGWLERRRQNLFRSWANGSELCKLDSSGAAFLKDGKLRWSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCEEEEE
FEAGKFEEKDCFTIKKLELVELMALTSGEAPLTIESQGKCRLRLVGDGKEMDVPFSDAEQ
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCHHH
ARKWMDQLMEKARCDL
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLHGLLWLPLLLIFVLLTALGWLERRRQNLFRSWANGSELCKLDSSGAAFLKDGKLRWSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCEEEEE
FEAGKFEEKDCFTIKKLELVELMALTSGEAPLTIESQGKCRLRLVGDGKEMDVPFSDAEQ
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCHHH
ARKWMDQLMEKARCDL
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA