| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is surE
Identifier: 78779749
GI number: 78779749
Start: 1282928
End: 1283737
Strand: Direct
Name: surE
Synonym: PMT9312_1365
Alternate gene names: 78779749
Gene position: 1282928-1283737 (Clockwise)
Preceding gene: 78779746
Following gene: 78779751
Centisome position: 75.06
GC content: 36.91
Gene sequence:
>810_bases ATGGAATCGTTAAATATATTAATTAGTAATGATGATGGTGTTTTTGCAGAGGGATTAAGAGCTTTAGCCAAATCAGCACA GAAGAGAGGTCATAAGGTAACAGTAGTATGTCCTGACCAAGAAAGATCAGCTACTGGTCATGGTCTTACTTTGCAATCTC CACTAAGAGTGGAAAGGGCAGACGAATTATTTGAGAGAGGGATCAAAGCTTGGGGATGTTCGGGCACGCCTGCTGATTGC GTCAAATTAGCATTATCTGAGCTCTTGGATAATAAACCTGATCTAGTTCTATCTGGAATAAATCACGGGCCAAATTTAGG GACAGATATTTTTTGTTCAGGCACTGTTGCAGCAGCCATGGAGGGAACTTTAGAAAATGTTCCCTCCATGGCAATAAGTG TTGCGAGTTTTAAATGGAAGAATTTTGAATTTGCTGGAGAAATGGCAATAAATATTGCAGAACAAGCAATTAAGGATAGT TGGCCACCTTCACTTCTACTAAATTTGAATATTCCTCCCTGCGAGAAAAATAAAATAAAAGAATTATCCTGGACAAGATT ATCAATCAGAAAATATAAAAATCAATTTTCTAAACGGGAAGACCCAAGGGGTGATGATTATTATTGGTTAGCAGGTGAGG TAGTTTTAGATCTTAAATCAAAAGGTTACGGTCCAAAAAATTGGCCCAGTGATGTATCTCAAATACAAGAAAATAAAATA TCGCTTACACCCGTTGAACCAGATTTATTTTGGAGAGGTGGTTTGGAGTTATTGCCTAAGATAAATAATTCATTTGTAAA TCCTTCTTAA
Upstream 100 bases:
>100_bases CAATTTGACTTAATGATTCAATTTGACGCACTGATATAGTAAAAGTAGGTATTGCTTTCATCTTACTTAAATATCGTCCA TAAATAAAATGTATTGAATA
Downstream 100 bases:
>100_bases AAGCCATAAAGAAAAGCAAAGTCCAAAAAAGTGAGCAGCAATAACTTGTGTATTACTGAGCACCGATAAAATCTCAAGCC CAGTGATTGGGATATCAGAT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MESLNILISNDDGVFAEGLRALAKSAQKRGHKVTVVCPDQERSATGHGLTLQSPLRVERADELFERGIKAWGCSGTPADC VKLALSELLDNKPDLVLSGINHGPNLGTDIFCSGTVAAAMEGTLENVPSMAISVASFKWKNFEFAGEMAINIAEQAIKDS WPPSLLLNLNIPPCEKNKIKELSWTRLSIRKYKNQFSKREDPRGDDYYWLAGEVVLDLKSKGYGPKNWPSDVSQIQENKI SLTPVEPDLFWRGGLELLPKINNSFVNPS
Sequences:
>Translated_269_residues MESLNILISNDDGVFAEGLRALAKSAQKRGHKVTVVCPDQERSATGHGLTLQSPLRVERADELFERGIKAWGCSGTPADC VKLALSELLDNKPDLVLSGINHGPNLGTDIFCSGTVAAAMEGTLENVPSMAISVASFKWKNFEFAGEMAINIAEQAIKDS WPPSLLLNLNIPPCEKNKIKELSWTRLSIRKYKNQFSKREDPRGDDYYWLAGEVVLDLKSKGYGPKNWPSDVSQIQENKI SLTPVEPDLFWRGGLELLPKINNSFVNPS >Mature_269_residues MESLNILISNDDGVFAEGLRALAKSAQKRGHKVTVVCPDQERSATGHGLTLQSPLRVERADELFERGIKAWGCSGTPADC VKLALSELLDNKPDLVLSGINHGPNLGTDIFCSGTVAAAMEGTLENVPSMAISVASFKWKNFEFAGEMAINIAEQAIKDS WPPSLLLNLNIPPCEKNKIKELSWTRLSIRKYKNQFSKREDPRGDDYYWLAGEVVLDLKSKGYGPKNWPSDVSQIQENKI SLTPVEPDLFWRGGLELLPKINNSFVNPS
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=246, Percent_Identity=37.8048780487805, Blast_Score=150, Evalue=7e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 29683; Mature: 29683
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLNILISNDDGVFAEGLRALAKSAQKRGHKVTVVCPDQERSATGHGLTLQSPLRVERA CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCCCHHHH DELFERGIKAWGCSGTPADCVKLALSELLDNKPDLVLSGINHGPNLGTDIFCSGTVAAAM HHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCHHHHHH EGTLENVPSMAISVASFKWKNFEFAGEMAINIAEQAIKDSWPPSLLLNLNIPPCEKNKIK HHHHHHCCHHHEEHHHEEECCCEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHH ELSWTRLSIRKYKNQFSKREDPRGDDYYWLAGEVVLDLKSKGYGPKNWPSDVSQIQENKI HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECEEEEEEHHCCCCCCCCHHHHHHHHHCCE SLTPVEPDLFWRGGLELLPKINNSFVNPS EEEECCCCCEECCCHHHHHCCCCCCCCCC >Mature Secondary Structure MESLNILISNDDGVFAEGLRALAKSAQKRGHKVTVVCPDQERSATGHGLTLQSPLRVERA CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCCCHHHH DELFERGIKAWGCSGTPADCVKLALSELLDNKPDLVLSGINHGPNLGTDIFCSGTVAAAM HHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCHHHHHH EGTLENVPSMAISVASFKWKNFEFAGEMAINIAEQAIKDSWPPSLLLNLNIPPCEKNKIK HHHHHHCCHHHEEHHHEEECCCEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHH ELSWTRLSIRKYKNQFSKREDPRGDDYYWLAGEVVLDLKSKGYGPKNWPSDVSQIQENKI HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECEEEEEEHHCCCCCCCCHHHHHHHHHCCE SLTPVEPDLFWRGGLELLPKINNSFVNPS EEEECCCCCEECCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA