Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is 78779714

Identifier: 78779714

GI number: 78779714

Start: 1244466

End: 1245467

Strand: Direct

Name: 78779714

Synonym: PMT9312_1330

Alternate gene names: NA

Gene position: 1244466-1245467 (Clockwise)

Preceding gene: 78779713

Following gene: 78779715

Centisome position: 72.81

GC content: 25.35

Gene sequence:

>1002_bases
ATGGCTTTACCAAAGATATATATAGGGCCAATAAGTAAAAATTGTATTGATTCAGTAATTGAATTAAATAATGAGGGATT
CAATATTGGTTTGATACCCTCACGTAGACAAATTGATTATGATAAAGGTTATGTAAATAATTGGACCACAAGAGAGTTTA
GTAATTATGTAAAATCAAGAAATCCAAATATCATCATCAAAAGAGATCATTGTGGTCCAGATCAAGGCAAAATAAAAGAT
AATGGTTTAGATTCAGCAATATATGATGTCAAAGAAAACTTTGACATCATACATATAGATCCATGGAAAACTTATAAAGA
TATAAATGATGCAGCCATAGCTACAAAAAATATTATTAAAGAGTGTGTGATTTATAATAAAAATATAAATTTTGAAATTG
GAACAGAGGAAGGGATTAGAAAGTATTCCCCTGAAGAATTCAAATATTTTATTGAAAAATTATTTGGTTTATTATCATTA
GATGAATTCAATTTAATAAAATATGGTGTTGTTCAGGGGGGGACTAGATTATCAATGAATAAAAATATTGGAAATTTTAA
TGAAGAAAAAATTAAAGATTTTATAGCTATTTGTAAGAATTTCAGCTTAATGTCAAAGGAACATAATGGAGATTATCTAA
AATTATCTGATATAAAAAGAAAATTTGATTTAGGTTTAAATGCAATTAACATTGCGCCCGAGATGGGTTTTATTGAGTCA
ACTTGTATTTTAGAACAAATAAAATTAGTTTCTGATAATGAAACTTTTAAAAAATTATTTAATAAATGTTTGCAGTCAGG
GCAATGGAAGAAATGGATACCTTTAGAAAAGCAGAATAAAATAATTGAAGAAAAAAATGAATTGTTAATAAAAATATCTG
GTCATTACATTTACTCAAGTGATATTGTTATTGACATTAAGAAAAAATATCCTGAATTGGATTCAAGAATTAAACTATCT
ATCAAAAACAGAATTAAATCAATCTTATGCAAAATAAAGTAA

Upstream 100 bases:

>100_bases
TTTGGAGAAGATGACATTGTAAGAGTATCAAATGATTATGTTTAAGTAGTTATTAAGTAAGGTTTTGAGGCTATAATATT
GTTTGAAGATTAACAGCTTG

Downstream 100 bases:

>100_bases
TTGCTTTTGATCTAGATGATGTTCTTTGTTATAGGACTTCAAATGAAGGAGATATAGAAAAATATAAATCATGCAAACCA
ATAAAATCAATGATAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MALPKIYIGPISKNCIDSVIELNNEGFNIGLIPSRRQIDYDKGYVNNWTTREFSNYVKSRNPNIIIKRDHCGPDQGKIKD
NGLDSAIYDVKENFDIIHIDPWKTYKDINDAAIATKNIIKECVIYNKNINFEIGTEEGIRKYSPEEFKYFIEKLFGLLSL
DEFNLIKYGVVQGGTRLSMNKNIGNFNEEKIKDFIAICKNFSLMSKEHNGDYLKLSDIKRKFDLGLNAINIAPEMGFIES
TCILEQIKLVSDNETFKKLFNKCLQSGQWKKWIPLEKQNKIIEEKNELLIKISGHYIYSSDIVIDIKKKYPELDSRIKLS
IKNRIKSILCKIK

Sequences:

>Translated_333_residues
MALPKIYIGPISKNCIDSVIELNNEGFNIGLIPSRRQIDYDKGYVNNWTTREFSNYVKSRNPNIIIKRDHCGPDQGKIKD
NGLDSAIYDVKENFDIIHIDPWKTYKDINDAAIATKNIIKECVIYNKNINFEIGTEEGIRKYSPEEFKYFIEKLFGLLSL
DEFNLIKYGVVQGGTRLSMNKNIGNFNEEKIKDFIAICKNFSLMSKEHNGDYLKLSDIKRKFDLGLNAINIAPEMGFIES
TCILEQIKLVSDNETFKKLFNKCLQSGQWKKWIPLEKQNKIIEEKNELLIKISGHYIYSSDIVIDIKKKYPELDSRIKLS
IKNRIKSILCKIK
>Mature_332_residues
ALPKIYIGPISKNCIDSVIELNNEGFNIGLIPSRRQIDYDKGYVNNWTTREFSNYVKSRNPNIIIKRDHCGPDQGKIKDN
GLDSAIYDVKENFDIIHIDPWKTYKDINDAAIATKNIIKECVIYNKNINFEIGTEEGIRKYSPEEFKYFIEKLFGLLSLD
EFNLIKYGVVQGGTRLSMNKNIGNFNEEKIKDFIAICKNFSLMSKEHNGDYLKLSDIKRKFDLGLNAINIAPEMGFIEST
CILEQIKLVSDNETFKKLFNKCLQSGQWKKWIPLEKQNKIIEEKNELLIKISGHYIYSSDIVIDIKKKYPELDSRIKLSI
KNRIKSILCKIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38600; Mature: 38469

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPKIYIGPISKNCIDSVIELNNEGFNIGLIPSRRQIDYDKGYVNNWTTREFSNYVKSR
CCCCCEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCC
NPNIIIKRDHCGPDQGKIKDNGLDSAIYDVKENFDIIHIDPWKTYKDINDAAIATKNIIK
CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCHHHHCCCHHHHHHHHHHH
ECVIYNKNINFEIGTEEGIRKYSPEEFKYFIEKLFGLLSLDEFNLIKYGVVQGGTRLSMN
HHHEECCCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEHEECCCEEEEEC
KNIGNFNEEKIKDFIAICKNFSLMSKEHNGDYLKLSDIKRKFDLGLNAINIAPEMGFIES
CCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCEEEHHHHHHHHHCCCCEEEECCCCCCHHH
TCILEQIKLVSDNETFKKLFNKCLQSGQWKKWIPLEKQNKIIEEKNELLIKISGHYIYSS
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEECCEEEEC
DIVIDIKKKYPELDSRIKLSIKNRIKSILCKIK
CEEEEEHHCCCCCCHHEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALPKIYIGPISKNCIDSVIELNNEGFNIGLIPSRRQIDYDKGYVNNWTTREFSNYVKSR
CCCCEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCC
NPNIIIKRDHCGPDQGKIKDNGLDSAIYDVKENFDIIHIDPWKTYKDINDAAIATKNIIK
CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCHHHHCCCHHHHHHHHHHH
ECVIYNKNINFEIGTEEGIRKYSPEEFKYFIEKLFGLLSLDEFNLIKYGVVQGGTRLSMN
HHHEECCCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEHEECCCEEEEEC
KNIGNFNEEKIKDFIAICKNFSLMSKEHNGDYLKLSDIKRKFDLGLNAINIAPEMGFIES
CCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCEEEHHHHHHHHHCCCCEEEECCCCCCHHH
TCILEQIKLVSDNETFKKLFNKCLQSGQWKKWIPLEKQNKIIEEKNELLIKISGHYIYSS
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEECCEEEEC
DIVIDIKKKYPELDSRIKLSIKNRIKSILCKIK
CEEEEEHHCCCCCCHHEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA