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The map label for this gene is oxaA [H]

Identifier: 78779670

GI number: 78779670

Start: 1192699

End: 1193841

Strand: Direct

Name: oxaA [H]

Synonym: PMT9312_1287

Alternate gene names: 78779670

Gene position: 1192699-1193841 (Clockwise)

Preceding gene: 78779669

Following gene: 78779671

Centisome position: 69.78

GC content: 36.83

Gene sequence:

>1143_bases
GTGATAGGGTTCATTTCTGAAAAACTACTTATCCCGATTCTAGATTTTTTCTACGGCTTAGTTCCTAGTTATGGTTTAGC
GATTGTTGCATTAACAGTTGTGATTAGAATTGCACTTTTCCCTTTAAGCGCTGGGTCCATTAGAAGCGCAAGAAGGATGA
AAATTGCACAACCAGTAATGAAAACAAGGCAAGCAGAAATAAAATCTAAGTTCTCAGGTGATCCAAAGAAACAGCAAGAA
GAATTAGGAAAACTAATGAATGAGTTTGGCAGTCCTCTTGCGGGTTGCCTTCCATTGATTGTACAAATGCCTATCCTATT
TGCATTGTTTGCAACCCTAAGGGGATCACCATTTGCTGATGTTCCCTACAACATAAATCTTAAAGTCGTTCCTCAAGATC
AAATTGCGGCTATTGATCCAAAACCTTATAAATCCCCAAGACACTCTATTTTTATTACAGAAAAATCACATTTTCCTGTA
ATCGCTACCATTCCAAATGGAACTAAATTAGGGACAGAAGAATCAATAAAAATAAATTTACAAACAACAAATGGTAATAG
CTATTCAGAAGTTTTATCCAAATACGATAATGGATCAAAATTTCTCCCTTCTTGGAAGGTATCAAAAGGATCAGAAAATA
TAAAAGTTTCCCAAGATGGAACAGTAACTGCGATTAAGCCAGGGGATGCAACAATAGAAGCGAAGATCCCTGGTCTAGCT
GCAAAAAGTGGTTTTCTTTTTATTAAAGCTCTCGGTCAGGTTGGTTTTTATGTCGATGGGGCTATTAATTGGGATATTGC
TACACTAGTTGGTGCTTTTGGATTAACTCTACTTCTATCTCAAGTTTTGTCTAGTCAGGGGATGCCTGCTAACCCACAGC
AATCAACAGCTAACAAAATCACACCAATCATGATTACTGGAATGTTCCTGTTTTTCCCACTACCAGCAGGAGTATTACTA
TATATGGTTGTCGCAAATATATTTCAGGCATTTCAGACCTTTCTTCTTAATAAAGAGACTCTTCCAGAGAATCTACAGAA
AATTCTGGATCAGCAATTATTGGCAAAAGATGAAGTAATAACAACTTCTGCTTCAACCATCTCAGAGAAAAGACTGCCTT
TTGAACCAAACAGTAAAAAATAG

Upstream 100 bases:

>100_bases
GGTTGAAGGATTTGCTACTAAATCCTAAATAAATTAATTACAAAAACCTTTTTTTCCTGTAAAATAAAATGTCTAGTAAA
ATTACACTTTCTTTAATATC

Downstream 100 bases:

>100_bases
TTTTAATTTTAAATAATGAATTCTTGGTGTAGAAATTTAGAATTACTTATAAAATCAAGGGCTTCATTAATTTGGATAAG
GACTAAAGAAGAGGAAAGAT

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMKTRQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPILFALFATLRGSPFADVPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPV
IATIPNGTKLGTEESIKINLQTTNGNSYSEVLSKYDNGSKFLPSWKVSKGSENIKVSQDGTVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGAINWDIATLVGAFGLTLLLSQVLSSQGMPANPQQSTANKITPIMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKETLPENLQKILDQQLLAKDEVITTSASTISEKRLPFEPNSKK

Sequences:

>Translated_380_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMKTRQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPILFALFATLRGSPFADVPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPV
IATIPNGTKLGTEESIKINLQTTNGNSYSEVLSKYDNGSKFLPSWKVSKGSENIKVSQDGTVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGAINWDIATLVGAFGLTLLLSQVLSSQGMPANPQQSTANKITPIMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKETLPENLQKILDQQLLAKDEVITTSASTISEKRLPFEPNSKK
>Mature_380_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMKTRQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPILFALFATLRGSPFADVPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPV
IATIPNGTKLGTEESIKINLQTTNGNSYSEVLSKYDNGSKFLPSWKVSKGSENIKVSQDGTVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGAINWDIATLVGAFGLTLLLSQVLSSQGMPANPQQSTANKITPIMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKETLPENLQKILDQQLLAKDEVITTSASTISEKRLPFEPNSKK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=127, Percent_Identity=32.2834645669291, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 41410; Mature: 41410

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KTRQAEIKSKFSGDPKKQQEELGKLMNEFGSPLAGCLPLIVQMPILFALFATLRGSPFAD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPVIATIPNGTKLGTEESIKINL
CCEEEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEE
QTTNGNSYSEVLSKYDNGSKFLPSWKVSKGSENIKVSQDGTVTAIKPGDATIEAKIPGLA
EECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEECCCCC
AKSGFLFIKALGQVGFYVDGAINWDIATLVGAFGLTLLLSQVLSSQGMPANPQQSTANKI
CCCCHHHEEEHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
TPIMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNKETLPENLQKILDQQLLAKDEVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHE
TTSASTISEKRLPFEPNSKK
ECCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KTRQAEIKSKFSGDPKKQQEELGKLMNEFGSPLAGCLPLIVQMPILFALFATLRGSPFAD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPVIATIPNGTKLGTEESIKINL
CCEEEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEE
QTTNGNSYSEVLSKYDNGSKFLPSWKVSKGSENIKVSQDGTVTAIKPGDATIEAKIPGLA
EECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEECCCCC
AKSGFLFIKALGQVGFYVDGAINWDIATLVGAFGLTLLLSQVLSSQGMPANPQQSTANKI
CCCCHHHEEEHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
TPIMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNKETLPENLQKILDQQLLAKDEVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHE
TTSASTISEKRLPFEPNSKK
ECCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]