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The map label for this gene is 78779659

Identifier: 78779659

GI number: 78779659

Start: 1184757

End: 1185542

Strand: Direct

Name: 78779659

Synonym: PMT9312_1276

Alternate gene names: NA

Gene position: 1184757-1185542 (Clockwise)

Preceding gene: 78779658

Following gene: 78779660

Centisome position: 69.32

GC content: 29.39

Gene sequence:

>786_bases
ATGGGTCTTTTATTAAAAGAGGGTATAGATATAAACCTTATTAAAAGTGCATTCTTAGCATTCTCCATAATTGGATTTTT
AATAGTTTTAATAAATATATTCCCAATATTTAAAAAAAGGCTTCCAAATGCTACTTTGCAGCTTGCAGGCCTAATAGGTA
ATACATCATTTCTCGGAATACCAATTGCAATAGCACTTCTCCCTACAAAAACGATAAACTTTACCATTGGATATGACTTA
GGAACAACACTATTCGCTTGGCTATTTGGGCCTTTTTTACTTCAAGAAATCTCGAAGAGCAACAATATCCCAAATTTCAA
AAGATTATTAAATGCATTAATAAATAATCCTGCCTCTAAAGGGATCATTGGAGTACTATTGGCCTACCTTTTCCAAATAA
ATGAACTATTAGGAAATTACCTTTGGATACCAGCAAGAATAGTAATTGCATTGGCAATAATTATTGTTGGAACAAAACTT
GGATTAATAACAAATCAAAAGGGTAAGATTTTTGATTTTAATAAAGAAATTAGATTTTCAATCTTACTTAAATTATTTAT
TCTTCCTTTTATTATTTTTCTAATAAGTAAATTTTTAAATTTTAACTTCTATCAATCATCAGCTGTAATCCTTCAAGCAG
GGACCCCAGCTGCAATATCAAATCTTTTAATGGCAGAGGCTTATTGCGTAAACCAGAAGATTGCTTCAAAAATTCTTTTT
ACTTCCACTTTGATTTCAATAGCTACAATTCCTCTTTTAACAATTTTTATAAATGCATTTAGATAA

Upstream 100 bases:

>100_bases
ACCTTTCTTAATTTTTGGATTTTTTCTTGGAAAAAAGAACCCAAAGATATCTGAATATATTGCAAGACCCCTAATAAAAT
TTGGCATTCCATTTAGTGTA

Downstream 100 bases:

>100_bases
AAAACTTAGAAAGGCCTTAAAAGCATGAATAATGAATATTGTAAAGAAAATATCCAGATAACTACATAATGTCTTAAGAT
TTAGGTTATGAAGTCAGCAA

Product: ABC transporter

Products: NA

Alternate protein names: Permease; Transporter Auxin Efflux Carrier; ABC Transporter; Transporter Auxin Efflux Carrier Family Protein

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MGLLLKEGIDINLIKSAFLAFSIIGFLIVLINIFPIFKKRLPNATLQLAGLIGNTSFLGIPIAIALLPTKTINFTIGYDL
GTTLFAWLFGPFLLQEISKSNNIPNFKRLLNALINNPASKGIIGVLLAYLFQINELLGNYLWIPARIVIALAIIIVGTKL
GLITNQKGKIFDFNKEIRFSILLKLFILPFIIFLISKFLNFNFYQSSAVILQAGTPAAISNLLMAEAYCVNQKIASKILF
TSTLISIATIPLLTIFINAFR

Sequences:

>Translated_261_residues
MGLLLKEGIDINLIKSAFLAFSIIGFLIVLINIFPIFKKRLPNATLQLAGLIGNTSFLGIPIAIALLPTKTINFTIGYDL
GTTLFAWLFGPFLLQEISKSNNIPNFKRLLNALINNPASKGIIGVLLAYLFQINELLGNYLWIPARIVIALAIIIVGTKL
GLITNQKGKIFDFNKEIRFSILLKLFILPFIIFLISKFLNFNFYQSSAVILQAGTPAAISNLLMAEAYCVNQKIASKILF
TSTLISIATIPLLTIFINAFR
>Mature_260_residues
GLLLKEGIDINLIKSAFLAFSIIGFLIVLINIFPIFKKRLPNATLQLAGLIGNTSFLGIPIAIALLPTKTINFTIGYDLG
TTLFAWLFGPFLLQEISKSNNIPNFKRLLNALINNPASKGIIGVLLAYLFQINELLGNYLWIPARIVIALAIIIVGTKLG
LITNQKGKIFDFNKEIRFSILLKLFILPFIIFLISKFLNFNFYQSSAVILQAGTPAAISNLLMAEAYCVNQKIASKILFT
STLISIATIPLLTIFINAFR

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28838; Mature: 28707

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLLKEGIDINLIKSAFLAFSIIGFLIVLINIFPIFKKRLPNATLQLAGLIGNTSFLGI
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH
PIAIALLPTKTINFTIGYDLGTTLFAWLFGPFLLQEISKSNNIPNFKRLLNALINNPASK
HHHHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
GIIGVLLAYLFQINELLGNYLWIPARIVIALAIIIVGTKLGLITNQKGKIFDFNKEIRFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEECCHHHHHH
ILLKLFILPFIIFLISKFLNFNFYQSSAVILQAGTPAAISNLLMAEAYCVNQKIASKILF
HHHHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
TSTLISIATIPLLTIFINAFR
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLLLKEGIDINLIKSAFLAFSIIGFLIVLINIFPIFKKRLPNATLQLAGLIGNTSFLGI
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH
PIAIALLPTKTINFTIGYDLGTTLFAWLFGPFLLQEISKSNNIPNFKRLLNALINNPASK
HHHHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
GIIGVLLAYLFQINELLGNYLWIPARIVIALAIIIVGTKLGLITNQKGKIFDFNKEIRFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEECCHHHHHH
ILLKLFILPFIIFLISKFLNFNFYQSSAVILQAGTPAAISNLLMAEAYCVNQKIASKILF
HHHHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
TSTLISIATIPLLTIFINAFR
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA