Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is 78779518

Identifier: 78779518

GI number: 78779518

Start: 1051556

End: 1052521

Strand: Direct

Name: 78779518

Synonym: PMT9312_1135

Alternate gene names: NA

Gene position: 1051556-1052521 (Clockwise)

Preceding gene: 78779512

Following gene: 78779520

Centisome position: 61.52

GC content: 37.89

Gene sequence:

>966_bases
ATGAACTACTCAAAATTATCAAAAAAATTATTTTTGTCTCTAAGCATCTTAGGACTTCTTTTGAATGCTGAACCCTCTAA
ATCTAATGAGTGGGAAGAGAATGCCGAAACGGTTTCTTGTACTACTGGACATGCAGACATGAGTAATGCTGCAGTTGGTG
CAGATCACTCCCAACCCTTTTCAATTGTTTCCAATGCAGTTAATCCACATAAAGCTTGTCTGCAAACACCAGAAGGTTAT
GAAATAACTCTATACAAAGTAGGAATGTGCAAAAATAATCCATTTGACGAAACTAATGATAATGTTAATCTCGCCTTTAC
TGAAGCAAATGGTTGCGTATGGACAATGGAATCCTCTGCGGGGGCAACTGTAGACTTAGCAGCGAGTTTAGGTCAATCAT
CTGCACTACCATCAGCAAGTAGTAGACCACCTTCAGGTACTTATAAATATTTTCTTATTGTAATGAATCCAAATATCAAA
TTAAAAGGATCTTTTATAACTACAGACGCTACTAACGGGGGGACTTTCCATACAAAACCAGGGACTTCAGAGGTTGATAC
AGAGGGAGAATTTGATAGCAGCTTATCTTCATCTCAATTTTTTACAGCTGATTTTAGTGATGCGCTTGGATTCAATAATA
GAGATGAATGTAGGTATTCCTATCAAAGAACAGTTTCAACTGGTTCTAATCAAGGAGTGATACAAGCTGTTTTAACAAAT
GATCTGTTTGAAACTGCAACCACTTGTAGTGGGATAACTAAATTAGTTGGTCAATTTAAAGCTACAACTCCAGTTGTGAT
TAGTGATGAAACTAATGGATTAGAAATTGCATTTAGTATTTCAGGAGCAGGACTTTGGGTTGAAGGCGGCGGTGGCGGTG
GCGGTGCAGGTCATCCAAGAAGCTTACATAATCAGCCAATATATGCTTACGCAGGTGACTTTGTACCCAAATTCAAAAAG
TTTTAG

Upstream 100 bases:

>100_bases
TATAGATGACTCAACCAGTAAAACGTAAGTATGATGTTCTGCTAGAAAGATCAGCAGGTGGGGTTTTCCAGAATAGGGCT
AAAGGAGTTTAATTTAATCT

Downstream 100 bases:

>100_bases
TAAAAAGCGACAAATCACTAACTTTTCAAACGACAAAATAGCTGCAAAAATAGTTTTCTAGCCTTAAAAGTGATTTTTTA
TAAAATATTTAGCAATTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNYSKLSKKLFLSLSILGLLLNAEPSKSNEWEENAETVSCTTGHADMSNAAVGADHSQPFSIVSNAVNPHKACLQTPEGY
EITLYKVGMCKNNPFDETNDNVNLAFTEANGCVWTMESSAGATVDLAASLGQSSALPSASSRPPSGTYKYFLIVMNPNIK
LKGSFITTDATNGGTFHTKPGTSEVDTEGEFDSSLSSSQFFTADFSDALGFNNRDECRYSYQRTVSTGSNQGVIQAVLTN
DLFETATTCSGITKLVGQFKATTPVVISDETNGLEIAFSISGAGLWVEGGGGGGGAGHPRSLHNQPIYAYAGDFVPKFKK
F

Sequences:

>Translated_321_residues
MNYSKLSKKLFLSLSILGLLLNAEPSKSNEWEENAETVSCTTGHADMSNAAVGADHSQPFSIVSNAVNPHKACLQTPEGY
EITLYKVGMCKNNPFDETNDNVNLAFTEANGCVWTMESSAGATVDLAASLGQSSALPSASSRPPSGTYKYFLIVMNPNIK
LKGSFITTDATNGGTFHTKPGTSEVDTEGEFDSSLSSSQFFTADFSDALGFNNRDECRYSYQRTVSTGSNQGVIQAVLTN
DLFETATTCSGITKLVGQFKATTPVVISDETNGLEIAFSISGAGLWVEGGGGGGGAGHPRSLHNQPIYAYAGDFVPKFKK
F
>Mature_321_residues
MNYSKLSKKLFLSLSILGLLLNAEPSKSNEWEENAETVSCTTGHADMSNAAVGADHSQPFSIVSNAVNPHKACLQTPEGY
EITLYKVGMCKNNPFDETNDNVNLAFTEANGCVWTMESSAGATVDLAASLGQSSALPSASSRPPSGTYKYFLIVMNPNIK
LKGSFITTDATNGGTFHTKPGTSEVDTEGEFDSSLSSSQFFTADFSDALGFNNRDECRYSYQRTVSTGSNQGVIQAVLTN
DLFETATTCSGITKLVGQFKATTPVVISDETNGLEIAFSISGAGLWVEGGGGGGGAGHPRSLHNQPIYAYAGDFVPKFKK
F

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34094; Mature: 34094

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYSKLSKKLFLSLSILGLLLNAEPSKSNEWEENAETVSCTTGHADMSNAAVGADHSQPF
CCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCH
SIVSNAVNPHKACLQTPEGYEITLYKVGMCKNNPFDETNDNVNLAFTEANGCVWTMESSA
HHHHCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEEECCC
GATVDLAASLGQSSALPSASSRPPSGTYKYFLIVMNPNIKLKGSFITTDATNGGTFHTKP
CCEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCEEEECC
GTSEVDTEGEFDSSLSSSQFFTADFSDALGFNNRDECRYSYQRTVSTGSNQGVIQAVLTN
CCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHH
DLFETATTCSGITKLVGQFKATTPVVISDETNGLEIAFSISGAGLWVEGGGGGGGAGHPR
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCC
SLHNQPIYAYAGDFVPKFKKF
CCCCCCEEEECCCCCHHHHCC
>Mature Secondary Structure
MNYSKLSKKLFLSLSILGLLLNAEPSKSNEWEENAETVSCTTGHADMSNAAVGADHSQPF
CCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCH
SIVSNAVNPHKACLQTPEGYEITLYKVGMCKNNPFDETNDNVNLAFTEANGCVWTMESSA
HHHHCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEEECCC
GATVDLAASLGQSSALPSASSRPPSGTYKYFLIVMNPNIKLKGSFITTDATNGGTFHTKP
CCEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCEEEECC
GTSEVDTEGEFDSSLSSSQFFTADFSDALGFNNRDECRYSYQRTVSTGSNQGVIQAVLTN
CCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHH
DLFETATTCSGITKLVGQFKATTPVVISDETNGLEIAFSISGAGLWVEGGGGGGGAGHPR
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCC
SLHNQPIYAYAGDFVPKFKKF
CCCCCCEEEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA