Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is 78779503

Identifier: 78779503

GI number: 78779503

Start: 1037160

End: 1037675

Strand: Direct

Name: 78779503

Synonym: PMT9312_1120

Alternate gene names: NA

Gene position: 1037160-1037675 (Clockwise)

Preceding gene: 78779502

Following gene: 78779504

Centisome position: 60.68

GC content: 29.07

Gene sequence:

>516_bases
ATGAAATTTTTAAAATTAATCTCAATTTTTTTAATATTTTTTGGAAATTTTTCTTATAAAAATTTAGTTCACGCAGAAAT
TAAGAATGCAAAAGACTATAAGGTACTTTCAAAACTTAGTAATCAGCTCTCCATATCAAACGTAGACTATTATCTAAAAC
AGGGCGATAAATCTATAAAAAATGGTGATTTTGACAAAGCTAAGGATTTCTATCTAGATGCAAGAAATTTAGCAAAGCAA
CTGGCTTCGTTTTATTCCGATCTTAATACTTCGTTCAAAGGAATTGATGCAAGGATACCAAATGAAATGCAGAGGAAAGG
TAAGCAAACATTACAAATTTTGGCAGAATCAAATGAAAGATTAGCTTCTTTATATATAAAAACTGAAAAACCTGATGTTG
CAGTACCCTTACTTGTAGAAACAATTAGAATAATGTCTCCTAATAGCCAAGAAGGTAAAGAAGCTTATGAAAGATTGATC
CAACTAGGATTTGTTGAAACTAAATACAAAGGTTAA

Upstream 100 bases:

>100_bases
CTAAATGAGAAAATGCTCAAAGAGGAAGAAATAGCATTAAAAAATGTAGGTAGATGAATCCGTAATAAGTTACTATTAAT
TTTAATAATTTAATGAAAAT

Downstream 100 bases:

>100_bases
TTTAAATTAATTATGATCACGAAAAAAGAAGTTATTAATTTAATTACAAAGAAATTACCAAGTTCCCAAGTTTTTGTTGA
GAACCTTAAGGGAAATGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKFLKLISIFLIFFGNFSYKNLVHAEIKNAKDYKVLSKLSNQLSISNVDYYLKQGDKSIKNGDFDKAKDFYLDARNLAKQ
LASFYSDLNTSFKGIDARIPNEMQRKGKQTLQILAESNERLASLYIKTEKPDVAVPLLVETIRIMSPNSQEGKEAYERLI
QLGFVETKYKG

Sequences:

>Translated_171_residues
MKFLKLISIFLIFFGNFSYKNLVHAEIKNAKDYKVLSKLSNQLSISNVDYYLKQGDKSIKNGDFDKAKDFYLDARNLAKQ
LASFYSDLNTSFKGIDARIPNEMQRKGKQTLQILAESNERLASLYIKTEKPDVAVPLLVETIRIMSPNSQEGKEAYERLI
QLGFVETKYKG
>Mature_171_residues
MKFLKLISIFLIFFGNFSYKNLVHAEIKNAKDYKVLSKLSNQLSISNVDYYLKQGDKSIKNGDFDKAKDFYLDARNLAKQ
LASFYSDLNTSFKGIDARIPNEMQRKGKQTLQILAESNERLASLYIKTEKPDVAVPLLVETIRIMSPNSQEGKEAYERLI
QLGFVETKYKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19620; Mature: 19620

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLKLISIFLIFFGNFSYKNLVHAEIKNAKDYKVLSKLSNQLSISNVDYYLKQGDKSIK
CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
NGDFDKAKDFYLDARNLAKQLASFYSDLNTSFKGIDARIPNEMQRKGKQTLQILAESNER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHH
LASLYIKTEKPDVAVPLLVETIRIMSPNSQEGKEAYERLIQLGFVETKYKG
EEHEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHCCCCC
>Mature Secondary Structure
MKFLKLISIFLIFFGNFSYKNLVHAEIKNAKDYKVLSKLSNQLSISNVDYYLKQGDKSIK
CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
NGDFDKAKDFYLDARNLAKQLASFYSDLNTSFKGIDARIPNEMQRKGKQTLQILAESNER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHH
LASLYIKTEKPDVAVPLLVETIRIMSPNSQEGKEAYERLIQLGFVETKYKG
EEHEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA