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The map label for this gene is speA [H]

Identifier: 78779478

GI number: 78779478

Start: 1007006

End: 1008397

Strand: Direct

Name: speA [H]

Synonym: PMT9312_1095

Alternate gene names: 78779478

Gene position: 1007006-1008397 (Clockwise)

Preceding gene: 78779475

Following gene: 78779479

Centisome position: 58.92

GC content: 31.54

Gene sequence:

>1392_bases
ATGAGCATTTCATCTTTTCTAACTAAAAAGTTTTTCAAGTCATTTTTCTTTCCCGCTCATAACAGAGGGGCAGCTTTACC
AAAGAAGTTAGTAAAATTATTAAAAAATCCCCCTGGTTATTGGGACTTGCCGGAACTGCCAGAGATAGGGTCACCACTAT
CCCAAAGCGGATTAATTGCTAAATCTCAAAGAGAATTCTCTGAAAAATTTGGAGCCAAAGGATGTTTTTATGGAGTTAAT
GGAGCTTCTGGATTAATACAATCAGCGATAATTGCAATGGCTAATCCAGGCGAAACTATCCTGATGCCCAGAAATGTTCA
TATAAGTGTTATAAAAACCTGTGCAATGCAGAATATACTTCCAATATTCTTTGACCTGGAATTTTCATCAGAAACAGGGC
ATTACAAACCAATAACAAAAATCTGGTTGGAAAAAGTATTTAAAAAATTAAATTTCAATGAGAATAAAATTGTAGGGATA
ATTCTTGTAAGTCCCTCTTATCATGGATATGCAGGAGATTTAGAGCCTTTAATAGATCTTTGTCATCAAAAAAATCTACC
TGTTTTAGTTGATGAAGCCCATGGTTCTTATTTCCTTTTTTGTGAAAATCTTAATTTACCAAAATCCGCTTTATCATCAA
ACGCTGATTTAGTCGTTCAATCATTGCATAAGTCGCTCAATGGTTTAACTCAAACGGCTGTACTCTGGTACAAAGGGGAT
CTAGTAAATGAATATAATTTAATCAAGAGTATTAATTTGTTGCAAACTACTAGTCCAAGTTCCTTATTACTTTCTTCTTG
TGAAGAGTCTATTAAAGACTGGCTTAATAAAAAAAGTTTATCAAAATATCAAAAAAGAATTTCAGAAGCAAAAAGTATTT
ACAAAAAATTAATGCACAAGAATATTCCTCTCATAGAAACCCAAGACCCCTTAAAAATTGTAGTAAATACCTCTAAGGCT
GGAATTGATGGTTTTACTGCTGATAAATTTTTTTATAGAAATGGTCTTATTGCTGAATTACCAGAAATGATGACTCTCAC
TTTTTGCTTAGGATTTGCAAATCAAAAAGATTTTATTAATTTATTTGAAAATTTGTGGAATAAATTACTATTAAATTCTA
ATAAATTAAAAAGTTTAGAAGTGCTCCAATCCCCCTTTAAATTAGTTCAAGCACCCGAAATTGAAATTGGAATTGCTTGG
AGAAGTGAGACTCGTAGTATTCCTTTCTCACAATCATTAAATAAAATATCTGGAGATATTATTTGCCCTTATCCTCCTGG
GATACCTCTACTAGTTCCTGGAGAAAAAATTGATAAAGATAGGTTTAATTGGATAAATAATCAAAGTTTATGCAACAAAG
ATCTGGTAAATTTTAATATAAGAGTCATATAA

Upstream 100 bases:

>100_bases
ACCTTTTGCTGAATATTTCGAATAAGATCTTGTCATTAAAATCAAAAGATATCAAAGAAGAATTCCATTTAGTTCATTCT
ATATATGTCAATAATACTTT

Downstream 100 bases:

>100_bases
GCATAGAAATTTGATATGAGATTAAGAAGCGGATTACTTATAGGAATTTTTGGTTTAATTGTTGTTTTGTTGGGGGGATG
GTTTTTTACATTAGCAACAG

Product: arginine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MSISSFLTKKFFKSFFFPAHNRGAALPKKLVKLLKNPPGYWDLPELPEIGSPLSQSGLIAKSQREFSEKFGAKGCFYGVN
GASGLIQSAIIAMANPGETILMPRNVHISVIKTCAMQNILPIFFDLEFSSETGHYKPITKIWLEKVFKKLNFNENKIVGI
ILVSPSYHGYAGDLEPLIDLCHQKNLPVLVDEAHGSYFLFCENLNLPKSALSSNADLVVQSLHKSLNGLTQTAVLWYKGD
LVNEYNLIKSINLLQTTSPSSLLLSSCEESIKDWLNKKSLSKYQKRISEAKSIYKKLMHKNIPLIETQDPLKIVVNTSKA
GIDGFTADKFFYRNGLIAELPEMMTLTFCLGFANQKDFINLFENLWNKLLLNSNKLKSLEVLQSPFKLVQAPEIEIGIAW
RSETRSIPFSQSLNKISGDIICPYPPGIPLLVPGEKIDKDRFNWINNQSLCNKDLVNFNIRVI

Sequences:

>Translated_463_residues
MSISSFLTKKFFKSFFFPAHNRGAALPKKLVKLLKNPPGYWDLPELPEIGSPLSQSGLIAKSQREFSEKFGAKGCFYGVN
GASGLIQSAIIAMANPGETILMPRNVHISVIKTCAMQNILPIFFDLEFSSETGHYKPITKIWLEKVFKKLNFNENKIVGI
ILVSPSYHGYAGDLEPLIDLCHQKNLPVLVDEAHGSYFLFCENLNLPKSALSSNADLVVQSLHKSLNGLTQTAVLWYKGD
LVNEYNLIKSINLLQTTSPSSLLLSSCEESIKDWLNKKSLSKYQKRISEAKSIYKKLMHKNIPLIETQDPLKIVVNTSKA
GIDGFTADKFFYRNGLIAELPEMMTLTFCLGFANQKDFINLFENLWNKLLLNSNKLKSLEVLQSPFKLVQAPEIEIGIAW
RSETRSIPFSQSLNKISGDIICPYPPGIPLLVPGEKIDKDRFNWINNQSLCNKDLVNFNIRVI
>Mature_462_residues
SISSFLTKKFFKSFFFPAHNRGAALPKKLVKLLKNPPGYWDLPELPEIGSPLSQSGLIAKSQREFSEKFGAKGCFYGVNG
ASGLIQSAIIAMANPGETILMPRNVHISVIKTCAMQNILPIFFDLEFSSETGHYKPITKIWLEKVFKKLNFNENKIVGII
LVSPSYHGYAGDLEPLIDLCHQKNLPVLVDEAHGSYFLFCENLNLPKSALSSNADLVVQSLHKSLNGLTQTAVLWYKGDL
VNEYNLIKSINLLQTTSPSSLLLSSCEESIKDWLNKKSLSKYQKRISEAKSIYKKLMHKNIPLIETQDPLKIVVNTSKAG
IDGFTADKFFYRNGLIAELPEMMTLTFCLGFANQKDFINLFENLWNKLLLNSNKLKSLEVLQSPFKLVQAPEIEIGIAWR
SETRSIPFSQSLNKISGDIICPYPPGIPLLVPGEKIDKDRFNWINNQSLCNKDLVNFNIRVI

Specific function: Catalyzes the formation of agmatine from arginine [H]

COG id: COG1982

COG function: function code E; Arginine/lysine/ornithine decarboxylases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000310
- InterPro:   IPR008286
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF01276 OKR_DC_1; PF03711 OKR_DC_1_C [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 52054; Mature: 51923

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00703 OKR_DC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISSFLTKKFFKSFFFPAHNRGAALPKKLVKLLKNPPGYWDLPELPEIGSPLSQSGLIA
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
KSQREFSEKFGAKGCFYGVNGASGLIQSAIIAMANPGETILMPRNVHISVIKTCAMQNIL
HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCC
PIFFDLEFSSETGHYKPITKIWLEKVFKKLNFNENKIVGIILVSPSYHGYAGDLEPLIDL
EEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHH
CHQKNLPVLVDEAHGSYFLFCENLNLPKSALSSNADLVVQSLHKSLNGLTQTAVLWYKGD
HCCCCCCEEEECCCCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHCCHHHHEEEEEECC
LVNEYNLIKSINLLQTTSPSSLLLSSCEESIKDWLNKKSLSKYQKRISEAKSIYKKLMHK
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NIPLIETQDPLKIVVNTSKAGIDGFTADKFFYRNGLIAELPEMMTLTFCLGFANQKDFIN
CCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH
LFENLWNKLLLNSNKLKSLEVLQSPFKLVQAPEIEIGIAWRSETRSIPFSQSLNKISGDI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCE
ICPYPPGIPLLVPGEKIDKDRFNWINNQSLCNKDLVNFNIRVI
ECCCCCCCCEEECCCCCCCHHHHCCCCCHHCCCCCCCEEEEEC
>Mature Secondary Structure 
SISSFLTKKFFKSFFFPAHNRGAALPKKLVKLLKNPPGYWDLPELPEIGSPLSQSGLIA
CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
KSQREFSEKFGAKGCFYGVNGASGLIQSAIIAMANPGETILMPRNVHISVIKTCAMQNIL
HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCC
PIFFDLEFSSETGHYKPITKIWLEKVFKKLNFNENKIVGIILVSPSYHGYAGDLEPLIDL
EEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHH
CHQKNLPVLVDEAHGSYFLFCENLNLPKSALSSNADLVVQSLHKSLNGLTQTAVLWYKGD
HCCCCCCEEEECCCCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHCCHHHHEEEEEECC
LVNEYNLIKSINLLQTTSPSSLLLSSCEESIKDWLNKKSLSKYQKRISEAKSIYKKLMHK
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NIPLIETQDPLKIVVNTSKAGIDGFTADKFFYRNGLIAELPEMMTLTFCLGFANQKDFIN
CCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH
LFENLWNKLLLNSNKLKSLEVLQSPFKLVQAPEIEIGIAWRSETRSIPFSQSLNKISGDI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCE
ICPYPPGIPLLVPGEKIDKDRFNWINNQSLCNKDLVNFNIRVI
ECCCCCCCCEEECCCCCCCHHHHCCCCCHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]