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The map label for this gene is 78779473

Identifier: 78779473

GI number: 78779473

Start: 1001402

End: 1001872

Strand: Direct

Name: 78779473

Synonym: PMT9312_1090

Alternate gene names: NA

Gene position: 1001402-1001872 (Clockwise)

Preceding gene: 78779472

Following gene: 78779475

Centisome position: 58.59

GC content: 29.94

Gene sequence:

>471_bases
ATGTTATCTTGTAGGAAAGATTATCAGTTAATGGGTATTATTTTTCCTTCAAATAGAATTCTTAAATTGTTAAGTATTGG
CTTTATTATATCCTTTTCGCTTTCTGAGATTAATGCAATAAATAAACAAATTAAAGCTGAACAAAATTTGATCGCTGCCT
CTGAAAAAGATCTTTTCCTATATAGGCAAATGGGGGCATCTTATCTTTGTATAGCTTCAAAAGCTAAGGTAGATTTTGAT
AAAGGTCTTGGCATTGCCAGTGCTACTTTTGCAAATGTAATAATTGGCAAACATGGTGGTGCTATTAAAGAGTTAGGAAA
TGAAAAGCTTGACAAAAAAAAATTATATAACGCAGGCACATTTCAAATTGTTGGAAGTGCTCTTAAAATTTGCCCTGAGA
GCATTCCAAATAATATCAAAAAAGATTATGAAAAAAGTTTAAAGCAACTTGTAAAGCAAAGTAAAAAATAA

Upstream 100 bases:

>100_bases
TATATTCATGGAACAAAAATAAGCTGAAAATAGTAGAGAATCATCACGAAATAAAAATTATTAAGTAAGATCTTTTTAAC
TATTAATATTAATAGTTAAA

Downstream 100 bases:

>100_bases
TTTCGTTAATTATCTGAACATTGAACTAACCGAACTTTCTTCGTGGATTCTCCAAATGGCTTCACCCAACATATTTGCGA
CAGAAAGGACTTTTAACTGC

Product: Villin headpiece domain-containing protein

Products: NA

Alternate protein names: CAMP Phosphodiesterases Class-II; CAMP Phosphodiesterase Class-II

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLSCRKDYQLMGIIFPSNRILKLLSIGFIISFSLSEINAINKQIKAEQNLIAASEKDLFLYRQMGASYLCIASKAKVDFD
KGLGIASATFANVIIGKHGGAIKELGNEKLDKKKLYNAGTFQIVGSALKICPESIPNNIKKDYEKSLKQLVKQSKK

Sequences:

>Translated_156_residues
MLSCRKDYQLMGIIFPSNRILKLLSIGFIISFSLSEINAINKQIKAEQNLIAASEKDLFLYRQMGASYLCIASKAKVDFD
KGLGIASATFANVIIGKHGGAIKELGNEKLDKKKLYNAGTFQIVGSALKICPESIPNNIKKDYEKSLKQLVKQSKK
>Mature_156_residues
MLSCRKDYQLMGIIFPSNRILKLLSIGFIISFSLSEINAINKQIKAEQNLIAASEKDLFLYRQMGASYLCIASKAKVDFD
KGLGIASATFANVIIGKHGGAIKELGNEKLDKKKLYNAGTFQIVGSALKICPESIPNNIKKDYEKSLKQLVKQSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17246; Mature: 17246

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSCRKDYQLMGIIFPSNRILKLLSIGFIISFSLSEINAINKQIKAEQNLIAASEKDLFL
CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YRQMGASYLCIASKAKVDFDKGLGIASATFANVIIGKHGGAIKELGNEKLDKKKLYNAGT
HHHHCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCH
FQIVGSALKICPESIPNNIKKDYEKSLKQLVKQSKK
HHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSCRKDYQLMGIIFPSNRILKLLSIGFIISFSLSEINAINKQIKAEQNLIAASEKDLFL
CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YRQMGASYLCIASKAKVDFDKGLGIASATFANVIIGKHGGAIKELGNEKLDKKKLYNAGT
HHHHCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCH
FQIVGSALKICPESIPNNIKKDYEKSLKQLVKQSKK
HHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA