Click here to switch to the map view.

The map label for this gene is 78779437

Identifier: 78779437

GI number: 78779437

Start: 965636

End: 965989

Strand: Reverse

Name: 78779437

Synonym: PMT9312_1054

Alternate gene names: NA

Gene position: 965989-965636 (Counterclockwise)

Preceding gene: 78779438

Following gene: 78779431

Centisome position: 56.52

GC content: 21.19

Gene sequence:

>354_bases
ATGAATATATTTTTAGCTATTTTAATTTTTGGAATTATATTTTTGTTCTATAAAAAATTTAATTCTAAAAAACCAAAGAA
CCTAAAATTAGACAAATTTAAAAATAAACTACAGAGTACTCAAACTAATATTGAAAGAATATTTTTAAGAGAGGAAGAAA
AAACTTTCTCAAACCCTAATATAAATATTCATATTGGAATCTACGATAATGAAGATATTATAAATAGAAAATCCAATATA
CACAGAGCAAGACTTTCAAAATTTAGGAAATCCAAATTAAATGGTGAAATTATATTCCAAGACGATGAACAAAGGATTTA
TAAATTTAATAATGGTAAGAAAGTTTACTTATAA

Upstream 100 bases:

>100_bases
ACTTTATCTAAAATTTTTACTTATGGAATCTTAAAAAAGGAAATATTAACTACTAAAAGTAACTTAGGTGCAGATATAAA
AATAAAAATTAAATAGTTTA

Downstream 100 bases:

>100_bases
TTTTAATTTCTAACTACACTCAAGACTTTCTCTTGTTGAAACGCCTGTTGTTGGATTGATCCCATCAGCAATTTCACAAA
GATTTCTTTGGTCTTCGCTG

Product: lipoprotein-like

Products: NA

Alternate protein names: Lipoprotein-Like

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNIFLAILIFGIIFLFYKKFNSKKPKNLKLDKFKNKLQSTQTNIERIFLREEEKTFSNPNINIHIGIYDNEDIINRKSNI
HRARLSKFRKSKLNGEIIFQDDEQRIYKFNNGKKVYL

Sequences:

>Translated_117_residues
MNIFLAILIFGIIFLFYKKFNSKKPKNLKLDKFKNKLQSTQTNIERIFLREEEKTFSNPNINIHIGIYDNEDIINRKSNI
HRARLSKFRKSKLNGEIIFQDDEQRIYKFNNGKKVYL
>Mature_117_residues
MNIFLAILIFGIIFLFYKKFNSKKPKNLKLDKFKNKLQSTQTNIERIFLREEEKTFSNPNINIHIGIYDNEDIINRKSNI
HRARLSKFRKSKLNGEIIFQDDEQRIYKFNNGKKVYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14102; Mature: 14102

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFLAILIFGIIFLFYKKFNSKKPKNLKLDKFKNKLQSTQTNIERIFLREEEKTFSNPN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHCCCCCC
INIHIGIYDNEDIINRKSNIHRARLSKFRKSKLNGEIIFQDDEQRIYKFNNGKKVYL
EEEEEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCEECC
>Mature Secondary Structure
MNIFLAILIFGIIFLFYKKFNSKKPKNLKLDKFKNKLQSTQTNIERIFLREEEKTFSNPN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHCCCCCC
INIHIGIYDNEDIINRKSNIHRARLSKFRKSKLNGEIIFQDDEQRIYKFNNGKKVYL
EEEEEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA