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The map label for this gene is 78779436

Identifier: 78779436

GI number: 78779436

Start: 965108

End: 965626

Strand: Direct

Name: 78779436

Synonym: PMT9312_1053

Alternate gene names: NA

Gene position: 965108-965626 (Clockwise)

Preceding gene: 78779435

Following gene: 78779439

Centisome position: 56.47

GC content: 36.22

Gene sequence:

>519_bases
ATGAAATTTTTTAGGTTTTTAAAATATTTTTTATGCATAACTTTTTCTTTCTTAGTTTTATCCTCTCCGGTTTTTGCTGG
GGCAAATGTTGCTGTCAAGGGCGAGGGAGATGAAGTCCCAAGTTATGTAAGATCTAATATTACAGGATTTGATTTCCATG
GAGAAGATCTTCATTTGTCTTCTATAGCTGGAGCAGTTGCGAGAGACGCAGATTTTAGTGATGTTGATTTACATGGAACT
ACATTAACCCTATCTGATTTAAAAGGTTCTAATTTAAATGGAATCGACCTGACCGATACTCTTTCTGATCGAGTTAATTT
CCAAAAAACAGATCTTAGAAATGCTGTTTTAATAAATATGATCGCATCAGGCAGCAGTTTTGCAGGAGCCAAAATAGAAG
GAGCAGATTTTTCTTACGCCATTCTTGACAGCGAAGACCAAAGAAATCTTTGTGAAATTGCTGATGGGATCAATCCAACA
ACAGGCGTTTCAACAAGAGAAAGTCTTGAGTGTAGTTAG

Upstream 100 bases:

>100_bases
TTTATAGTGTTAAATAATCTTAAAAAGGAGTTCCAAATTTATACATCAATTTAAAAAATTATCTAATTGTTATAAAATAC
AATTATTCAAATTTTTTAAT

Downstream 100 bases:

>100_bases
AAATTAAAATTATAAGTAAACTTTCTTACCATTATTAAATTTATAAATCCTTTGTTCATCGTCTTGGAATATAATTTCAC
CATTTAATTTGGATTTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein; Pentapeptide Repeat Family Protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKFFRFLKYFLCITFSFLVLSSPVFAGANVAVKGEGDEVPSYVRSNITGFDFHGEDLHLSSIAGAVARDADFSDVDLHGT
TLTLSDLKGSNLNGIDLTDTLSDRVNFQKTDLRNAVLINMIASGSSFAGAKIEGADFSYAILDSEDQRNLCEIADGINPT
TGVSTRESLECS

Sequences:

>Translated_172_residues
MKFFRFLKYFLCITFSFLVLSSPVFAGANVAVKGEGDEVPSYVRSNITGFDFHGEDLHLSSIAGAVARDADFSDVDLHGT
TLTLSDLKGSNLNGIDLTDTLSDRVNFQKTDLRNAVLINMIASGSSFAGAKIEGADFSYAILDSEDQRNLCEIADGINPT
TGVSTRESLECS
>Mature_172_residues
MKFFRFLKYFLCITFSFLVLSSPVFAGANVAVKGEGDEVPSYVRSNITGFDFHGEDLHLSSIAGAVARDADFSDVDLHGT
TLTLSDLKGSNLNGIDLTDTLSDRVNFQKTDLRNAVLINMIASGSSFAGAKIEGADFSYAILDSEDQRNLCEIADGINPT
TGVSTRESLECS

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18535; Mature: 18535

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFRFLKYFLCITFSFLVLSSPVFAGANVAVKGEGDEVPSYVRSNITGFDFHGEDLHLS
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCEEHH
SIAGAVARDADFSDVDLHGTTLTLSDLKGSNLNGIDLTDTLSDRVNFQKTDLRNAVLINM
HHHHHHHCCCCCCCEECCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHCCEEEEEE
IASGSSFAGAKIEGADFSYAILDSEDQRNLCEIADGINPTTGVSTRESLECS
EECCCCCCCCEECCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKFFRFLKYFLCITFSFLVLSSPVFAGANVAVKGEGDEVPSYVRSNITGFDFHGEDLHLS
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCEEHH
SIAGAVARDADFSDVDLHGTTLTLSDLKGSNLNGIDLTDTLSDRVNFQKTDLRNAVLINM
HHHHHHHCCCCCCCEECCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHCCEEEEEE
IASGSSFAGAKIEGADFSYAILDSEDQRNLCEIADGINPTTGVSTRESLECS
EECCCCCCCCEECCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA