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The map label for this gene is 78779432

Identifier: 78779432

GI number: 78779432

Start: 961121

End: 962563

Strand: Direct

Name: 78779432

Synonym: PMT9312_1049

Alternate gene names: NA

Gene position: 961121-962563 (Clockwise)

Preceding gene: 78779429

Following gene: 78779433

Centisome position: 56.23

GC content: 33.19

Gene sequence:

>1443_bases
ATGAAATATATGTTTTCAAATTATCGTCCTAAAAATAGTTTTGATGAATACTTTAAGGATAATGTCAACTCTGCTAGGGA
AATATTAATTCCACTTCTGTCCTCTTTAGATAATATGGGTCTTGAAGAATTAAACAGAAATCATTCTGCTGCAAAAAAAT
TATTACTAAGACATGGTGCAACTTTTAGATTAAACGATACTGGTTTAAAAGGCACGGAGAGAATATTACCTTTTGATCCA
CTTCCAAGAATAATTAGTAAAGATGATTGGGTAACATTAGAAAAAGGTTTAAAACAAAGGCTTGAGGCAATTGATTTATT
CCTAGATGATATTTATAATTCTCAGAATATAATTAATGATGGAATAATTCCAAGAGAATTAATAGAAAGTTCAGATGGTT
GGAGACCCCAGATGATAGGTTTCAAGCCTCCATTAAATAAATGGTGTCAAATTTCAGGACTTGATTTAATAAGGGACAGA
AAGGGAGATTGGCATGTTTTAGAAGATAATTTAAGGTGTCCTTCTGGTGTTGCTTATTTTTTAGAAAATAGATTAGTTAT
GAAAAATATTTTCCCTAATCTTTTCTCTGGAAGGATAGTAAAACCAATTGATGAATATCCATCATATCTTCTAAAAACTC
TTCAAGAACTTGCTGTTTGGACAGACACCCCCAAGATAGTTCTACTAACTCCTGGAATTTTTAACAGTGCGTATTTTGAA
CATAGTTATTTAGCTCAAGAAATGGGCATTCAACTTGTTCAAGGTCATGACTTAGTTTGTAATGATGATTATGTATATTT
AAAAACTACCTCTGGATTAAAAAGAGTAGATGTTATTTACAGACGAATTGATGATGATTTCTTAGATCCTCTTAATTTCA
GGAAAGATTCCTGCCTTGGTGTCAGCGGATTACTTGATGTTTTCAAGGCAGGTCATGTTGCTTTAGCAAATGCCCCTGGG
ACAGGAATAGCAGATGACAAAATGATTTATTCTTTTGTTCCAAGAATGATAAAATATTATCTCAATGAAGAAATTATTAT
TAAAAATGTAGAAACATATATTTGTCATTACCAAAAGGATCGGGAATATGTTCTAGAAAATTTACCAAAACTTGTTGTTA
AGTCTGTTGCTGAAGCTGGGGGGTATGGAATGTTAATTGGGCCCCACTCAACAAGCAGTGAAATAGAAGAATTTGCTAAT
AAAATCAGAAAAAATCCCAGAAATTTCATAGCGCAACCAACATTAGAATTATCTACAGTGCCATCGTTATGCAATGGGGA
ACTATATCCATGTCATGTTGATTTAAGGCCATACATATTAAGAGGGAGAGATACATGGGTTAGTCCTGGTGGGCTTACAA
GAGTCGCTTTAAAAAAAGGATCATTAGTTGTCAACTCTTCTCAAGGGGGTGGATGCAAAGATACATGGGTTGTGGGTAAA
TAA

Upstream 100 bases:

>100_bases
CAATGATCAGAATAATGAAATAGATCAAGTTAAGAGATGTTTTTTTTTGTAGCTATAAATACGAATTAAGATTCGAAGCT
AAAGTAAAAGTTATAAAACG

Downstream 100 bases:

>100_bases
TATGCTTTTAAGTCGTGTAGCAGAATCTCTTTATTGGATTAATCGTTATTTAGAACGCGCAGAAAATATATCTCGTTTCG
TGGAAGTAAGTGAAGCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MKYMFSNYRPKNSFDEYFKDNVNSAREILIPLLSSLDNMGLEELNRNHSAAKKLLLRHGATFRLNDTGLKGTERILPFDP
LPRIISKDDWVTLEKGLKQRLEAIDLFLDDIYNSQNIINDGIIPRELIESSDGWRPQMIGFKPPLNKWCQISGLDLIRDR
KGDWHVLEDNLRCPSGVAYFLENRLVMKNIFPNLFSGRIVKPIDEYPSYLLKTLQELAVWTDTPKIVLLTPGIFNSAYFE
HSYLAQEMGIQLVQGHDLVCNDDYVYLKTTSGLKRVDVIYRRIDDDFLDPLNFRKDSCLGVSGLLDVFKAGHVALANAPG
TGIADDKMIYSFVPRMIKYYLNEEIIIKNVETYICHYQKDREYVLENLPKLVVKSVAEAGGYGMLIGPHSTSSEIEEFAN
KIRKNPRNFIAQPTLELSTVPSLCNGELYPCHVDLRPYILRGRDTWVSPGGLTRVALKKGSLVVNSSQGGGCKDTWVVGK

Sequences:

>Translated_480_residues
MKYMFSNYRPKNSFDEYFKDNVNSAREILIPLLSSLDNMGLEELNRNHSAAKKLLLRHGATFRLNDTGLKGTERILPFDP
LPRIISKDDWVTLEKGLKQRLEAIDLFLDDIYNSQNIINDGIIPRELIESSDGWRPQMIGFKPPLNKWCQISGLDLIRDR
KGDWHVLEDNLRCPSGVAYFLENRLVMKNIFPNLFSGRIVKPIDEYPSYLLKTLQELAVWTDTPKIVLLTPGIFNSAYFE
HSYLAQEMGIQLVQGHDLVCNDDYVYLKTTSGLKRVDVIYRRIDDDFLDPLNFRKDSCLGVSGLLDVFKAGHVALANAPG
TGIADDKMIYSFVPRMIKYYLNEEIIIKNVETYICHYQKDREYVLENLPKLVVKSVAEAGGYGMLIGPHSTSSEIEEFAN
KIRKNPRNFIAQPTLELSTVPSLCNGELYPCHVDLRPYILRGRDTWVSPGGLTRVALKKGSLVVNSSQGGGCKDTWVVGK
>Mature_480_residues
MKYMFSNYRPKNSFDEYFKDNVNSAREILIPLLSSLDNMGLEELNRNHSAAKKLLLRHGATFRLNDTGLKGTERILPFDP
LPRIISKDDWVTLEKGLKQRLEAIDLFLDDIYNSQNIINDGIIPRELIESSDGWRPQMIGFKPPLNKWCQISGLDLIRDR
KGDWHVLEDNLRCPSGVAYFLENRLVMKNIFPNLFSGRIVKPIDEYPSYLLKTLQELAVWTDTPKIVLLTPGIFNSAYFE
HSYLAQEMGIQLVQGHDLVCNDDYVYLKTTSGLKRVDVIYRRIDDDFLDPLNFRKDSCLGVSGLLDVFKAGHVALANAPG
TGIADDKMIYSFVPRMIKYYLNEEIIIKNVETYICHYQKDREYVLENLPKLVVKSVAEAGGYGMLIGPHSTSSEIEEFAN
KIRKNPRNFIAQPTLELSTVPSLCNGELYPCHVDLRPYILRGRDTWVSPGGLTRVALKKGSLVVNSSQGGGCKDTWVVGK

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 54576; Mature: 54576

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYMFSNYRPKNSFDEYFKDNVNSAREILIPLLSSLDNMGLEELNRNHSAAKKLLLRHGA
CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCC
TFRLNDTGLKGTERILPFDPLPRIISKDDWVTLEKGLKQRLEAIDLFLDDIYNSQNIIND
EEEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GIIPRELIESSDGWRPQMIGFKPPLNKWCQISGLDLIRDRKGDWHVLEDNLRCPSGVAYF
CCCHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCCCCEEEECCCCCCCCHHHHH
LENRLVMKNIFPNLFSGRIVKPIDEYPSYLLKTLQELAVWTDTPKIVLLTPGIFNSAYFE
HHCCHHHHHHCHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH
HSYLAQEMGIQLVQGHDLVCNDDYVYLKTTSGLKRVDVIYRRIDDDFLDPLNFRKDSCLG
HHHHHHHHCCEEECCCCEEECCCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCCCCC
VSGLLDVFKAGHVALANAPGTGIADDKMIYSFVPRMIKYYLNEEIIIKNVETYICHYQKD
HHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHH
REYVLENLPKLVVKSVAEAGGYGMLIGPHSTSSEIEEFANKIRKNPRNFIAQPTLELSTV
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHCC
PSLCNGELYPCHVDLRPYILRGRDTWVSPGGLTRVALKKGSLVVNSSQGGGCKDTWVVGK
CHHHCCCEEEEEECCCCEEEECCCCEECCCCCEEEEEECCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKYMFSNYRPKNSFDEYFKDNVNSAREILIPLLSSLDNMGLEELNRNHSAAKKLLLRHGA
CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCC
TFRLNDTGLKGTERILPFDPLPRIISKDDWVTLEKGLKQRLEAIDLFLDDIYNSQNIIND
EEEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GIIPRELIESSDGWRPQMIGFKPPLNKWCQISGLDLIRDRKGDWHVLEDNLRCPSGVAYF
CCCHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCCCCEEEECCCCCCCCHHHHH
LENRLVMKNIFPNLFSGRIVKPIDEYPSYLLKTLQELAVWTDTPKIVLLTPGIFNSAYFE
HHCCHHHHHHCHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH
HSYLAQEMGIQLVQGHDLVCNDDYVYLKTTSGLKRVDVIYRRIDDDFLDPLNFRKDSCLG
HHHHHHHHCCEEECCCCEEECCCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCCCCC
VSGLLDVFKAGHVALANAPGTGIADDKMIYSFVPRMIKYYLNEEIIIKNVETYICHYQKD
HHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHH
REYVLENLPKLVVKSVAEAGGYGMLIGPHSTSSEIEEFANKIRKNPRNFIAQPTLELSTV
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHCC
PSLCNGELYPCHVDLRPYILRGRDTWVSPGGLTRVALKKGSLVVNSSQGGGCKDTWVVGK
CHHHCCCEEEEEECCCCEEEECCCCEECCCCCEEEEEECCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]