Click here to switch to the map view.

The map label for this gene is znuB [C]

Identifier: 78779423

GI number: 78779423

Start: 953254

End: 954039

Strand: Reverse

Name: znuB [C]

Synonym: PMT9312_1040

Alternate gene names: 78779423

Gene position: 954039-953254 (Counterclockwise)

Preceding gene: 78779425

Following gene: 78779421

Centisome position: 55.82

GC content: 35.75

Gene sequence:

>786_bases
ATGTCTTTTATTAATAACAACTGGTGGCTGGTTCCATTAATAATAACTATATTCTCCGGGATTTTATGCCCAGCTATGGG
AACTGTATTAATCACTCATAAGAGATTATTACAAGTTAATTTAATCTCTCATTGCGTGTTGCCTGGACTTGCTCTCGCAC
TAGCGCTTGGAATTCACCCCTCAATTGGTGGTGTTATAAGTGGTCTTCTGGGCTCAGTAATTGCGGAAAGTTTAACTAAT
AGAAAAAGTGAAAATTATGAAGCAGTTATGAATACTATTCTCGCTGGAATGCTTGGGTTTGGGGTCCTTATAATCCCTTT
ACTCGGAATAAGGATTGATTTGGAGGCAGTATTATTTGGCGATTTATTGACAGCAAATTTTGGAGATTTACTTAGAACAA
TAATTGCTTTTTTAGTATTTATACTTTTAATGACTTTTGGATATGAAAAGGTTGTTTATGTGGGATTGGATCCAGAAGGT
GCATCCGCTAGTGGTATAAACGTTTCTTTATTAAATCTTGCTTTGAGTTTTACGACGGCATTAGTAATTGTTAGTTCAAT
GTCAGCAGTCGGAGTAATTCTTGTTATTGCTCTTCTTTCTACCCCAACTCTATTAGGGATTAATAAGGCTCATAGTTTAA
GAATTGCAATGATGAGGTCTTCATTTTTTGGATTATGCATCTCACTTCTGGGCTTTATTCTCTCTATAGTCTTTAATTTG
TCGCCTGGACCTGCAATTAGTGTTATTTGTGTCGCATCTCTTTTGATTCCTAAACTTCGCAAATAA

Upstream 100 bases:

>100_bases
AGAAGTTGTTCTTGTCTTTTGGTAATGTCAGAATTAGTTACCATTGTTTCCGAAATCTTTTTTTGTCCCGTATTTTTGAT
CATACCGAATCATTCGAATA

Downstream 100 bases:

>100_bases
TTAAATCTTAAATGTCCAATCAGAGTTTAATGCTTGAGCTTCTGGATTGTTTTTTAAAGCTACTTCCATAGCCTCTTTTT
TATTATTAGCTATAACAACC

Product: ABC transporter

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSFINNNWWLVPLIITIFSGILCPAMGTVLITHKRLLQVNLISHCVLPGLALALALGIHPSIGGVISGLLGSVIAESLTN
RKSENYEAVMNTILAGMLGFGVLIIPLLGIRIDLEAVLFGDLLTANFGDLLRTIIAFLVFILLMTFGYEKVVYVGLDPEG
ASASGINVSLLNLALSFTTALVIVSSMSAVGVILVIALLSTPTLLGINKAHSLRIAMMRSSFFGLCISLLGFILSIVFNL
SPGPAISVICVASLLIPKLRK

Sequences:

>Translated_261_residues
MSFINNNWWLVPLIITIFSGILCPAMGTVLITHKRLLQVNLISHCVLPGLALALALGIHPSIGGVISGLLGSVIAESLTN
RKSENYEAVMNTILAGMLGFGVLIIPLLGIRIDLEAVLFGDLLTANFGDLLRTIIAFLVFILLMTFGYEKVVYVGLDPEG
ASASGINVSLLNLALSFTTALVIVSSMSAVGVILVIALLSTPTLLGINKAHSLRIAMMRSSFFGLCISLLGFILSIVFNL
SPGPAISVICVASLLIPKLRK
>Mature_260_residues
SFINNNWWLVPLIITIFSGILCPAMGTVLITHKRLLQVNLISHCVLPGLALALALGIHPSIGGVISGLLGSVIAESLTNR
KSENYEAVMNTILAGMLGFGVLIIPLLGIRIDLEAVLFGDLLTANFGDLLRTIIAFLVFILLMTFGYEKVVYVGLDPEGA
SASGINVSLLNLALSFTTALVIVSSMSAVGVILVIALLSTPTLLGINKAHSLRIAMMRSSFFGLCISLLGFILSIVFNLS
PGPAISVICVASLLIPKLRK

Specific function: Involved In The High-Affinity Zinc Uptake Transport System. [C]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1788166, Length=223, Percent_Identity=25.1121076233184, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 27641; Mature: 27510

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFINNNWWLVPLIITIFSGILCPAMGTVLITHKRLLQVNLISHCVLPGLALALALGIHP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SIGGVISGLLGSVIAESLTNRKSENYEAVMNTILAGMLGFGVLIIPLLGIRIDLEAVLFG
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLTANFGDLLRTIIAFLVFILLMTFGYEKVVYVGLDPEGASASGINVSLLNLALSFTTA
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
LVIVSSMSAVGVILVIALLSTPTLLGINKAHSLRIAMMRSSFFGLCISLLGFILSIVFNL
HHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPGPAISVICVASLLIPKLRK
CCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFINNNWWLVPLIITIFSGILCPAMGTVLITHKRLLQVNLISHCVLPGLALALALGIHP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SIGGVISGLLGSVIAESLTNRKSENYEAVMNTILAGMLGFGVLIIPLLGIRIDLEAVLFG
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLTANFGDLLRTIIAFLVFILLMTFGYEKVVYVGLDPEGASASGINVSLLNLALSFTTA
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
LVIVSSMSAVGVILVIALLSTPTLLGINKAHSLRIAMMRSSFFGLCISLLGFILSIVFNL
HHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPGPAISVICVASLLIPKLRK
CCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7927711 [H]