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The map label for this gene is 78779396

Identifier: 78779396

GI number: 78779396

Start: 936395

End: 936556

Strand: Direct

Name: 78779396

Synonym: PMT9312_1012

Alternate gene names: NA

Gene position: 936395-936556 (Clockwise)

Preceding gene: 78779395

Following gene: 78779400

Centisome position: 54.79

GC content: 27.16

Gene sequence:

>162_bases
ATGTTTGCTATTGCACTTGGATTGTCTCCTATTGAAAAAATCACTGTTGCAATAACTGCTTCGATTTTTTTAATTTCTTT
TACATGGATCTCAATTAAGGGAGATTTAAATAAAATTGCTAAGGAACTAATTGAAGATAATGATAATAATCAGGATAATT
AA

Upstream 100 bases:

>100_bases
TTTTTATTATTTTGAATAATTAAATATCATTTCAAAAACAAAATTGAATTAAACTATTTTATAAAATTCAATATAATAAA
AGATTAATATTTGGTTTCAT

Downstream 100 bases:

>100_bases
AGAATCCTTTAACCTACTTTTTATGCAAACCAGGATAATCAATAATATGTCTTATTTCTTTAAGAGAAGAGCCATATACT
TTATCACCATTTAAGTGAAC

Product: photosystem II reaction center N protein-like

Products: NA

Alternate protein names: Photosystem II Reaction Centre N Protein; Photosystem II Reaction Center N Protein-Like

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MFAIALGLSPIEKITVAITASIFLISFTWISIKGDLNKIAKELIEDNDNNQDN

Sequences:

>Translated_53_residues
MFAIALGLSPIEKITVAITASIFLISFTWISIKGDLNKIAKELIEDNDNNQDN
>Mature_53_residues
MFAIALGLSPIEKITVAITASIFLISFTWISIKGDLNKIAKELIEDNDNNQDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5851; Mature: 5851

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAIALGLSPIEKITVAITASIFLISFTWISIKGDLNKIAKELIEDNDNNQDN
CEEEEECCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFAIALGLSPIEKITVAITASIFLISFTWISIKGDLNKIAKELIEDNDNNQDN
CEEEEECCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA