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The map label for this gene is ygaJ [H]

Identifier: 78779384

GI number: 78779384

Start: 927790

End: 928470

Strand: Reverse

Name: ygaJ [H]

Synonym: PMT9312_1000

Alternate gene names: 78779384

Gene position: 928470-927790 (Counterclockwise)

Preceding gene: 78779388

Following gene: 78779382

Centisome position: 54.32

GC content: 30.54

Gene sequence:

>681_bases
ATGAATAGTAAAAATATAGTCGCAATTGGGGGAGGTGGATTTGGAAGATCTTTAGGCTCTCTTGAAATTGAGAAATATTT
AATTTCTTTAATTAATAAAAAAAGACCAAAAATATGCTTCATACCTACAGCATCTGGAGACAGTAGTCTCTATAAACTGA
ATTTTTATAGAGCATTTTCTAAGCTTGATTGCATAACAAGTCATATAGATTTTTTCTCAAGAACAGAGAACTTAGAGGAG
AAAATTTTAAGTCAAGATATCATTTATGTTGGAGGAGGGAATACTAAAAGTATGTTGGCAGTTTGGAAAGAATGGAATTT
ACATAACATTTTACAAAATGCTTATGAAAAAGGAATTGTAATGAGTGGTGTAAGTGCTGGAGCTATCTGTTGGTTTGATA
AGGGTATTACTGATTCTTTTGCAAGAGAATTGTCTATATTAGATTGCCTAGGGATAGTTAATGATGTAGCCTGTCCTCAT
TTTGACGAAGAGAAAGAAAGGGAACCTTACGTTAATGATGTTATAAGGAGAGAAATTATTAAATCGTGTATTTGTATTGA
AGGCAATTGTGCTTTGCATATAAAAAATGATGTTGAATATTATTCAATAGATTTTGGAAATGGTAAGAATTGTTTTAGGA
TCTCAAAGGAAAATAATAAGCTAAAAAAAGAAATCCTCTAA

Upstream 100 bases:

>100_bases
TCATCTAATGATTGAATTGAATCAAAATAAACCTTCTTTAATTCAATTTGATCTTTAATAGTAATTTGTCTTAAATTCAT
AAACAAATCATACATTTAAT

Downstream 100 bases:

>100_bases
AGTGAAAATTAATATAGAAATTTTAGATCTCATCATTTTTTGAGATAGAAGTAAATTCAATTCCTTTGTATTTTACAAAT
GAAGCAGTCCATACTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MNSKNIVAIGGGGFGRSLGSLEIEKYLISLINKKRPKICFIPTASGDSSLYKLNFYRAFSKLDCITSHIDFFSRTENLEE
KILSQDIIYVGGGNTKSMLAVWKEWNLHNILQNAYEKGIVMSGVSAGAICWFDKGITDSFARELSILDCLGIVNDVACPH
FDEEKEREPYVNDVIRREIIKSCICIEGNCALHIKNDVEYYSIDFGNGKNCFRISKENNKLKKEIL

Sequences:

>Translated_226_residues
MNSKNIVAIGGGGFGRSLGSLEIEKYLISLINKKRPKICFIPTASGDSSLYKLNFYRAFSKLDCITSHIDFFSRTENLEE
KILSQDIIYVGGGNTKSMLAVWKEWNLHNILQNAYEKGIVMSGVSAGAICWFDKGITDSFARELSILDCLGIVNDVACPH
FDEEKEREPYVNDVIRREIIKSCICIEGNCALHIKNDVEYYSIDFGNGKNCFRISKENNKLKKEIL
>Mature_226_residues
MNSKNIVAIGGGGFGRSLGSLEIEKYLISLINKKRPKICFIPTASGDSSLYKLNFYRAFSKLDCITSHIDFFSRTENLEE
KILSQDIIYVGGGNTKSMLAVWKEWNLHNILQNAYEKGIVMSGVSAGAICWFDKGITDSFARELSILDCLGIVNDVACPH
FDEEKEREPYVNDVIRREIIKSCICIEGNCALHIKNDVEYYSIDFGNGKNCFRISKENNKLKKEIL

Specific function: Unknown

COG id: COG3340

COG function: function code E; Peptidase E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: NA

Molecular weight: Translated: 25483; Mature: 25483

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKNIVAIGGGGFGRSLGSLEIEKYLISLINKKRPKICFIPTASGDSSLYKLNFYRAFS
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHHH
KLDCITSHIDFFSRTENLEEKILSQDIIYVGGGNTKSMLAVWKEWNLHNILQNAYEKGIV
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCEE
MSGVSAGAICWFDKGITDSFARELSILDCLGIVNDVACPHFDEEKEREPYVNDVIRREII
EECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHH
KSCICIEGNCALHIKNDVEYYSIDFGNGKNCFRISKENNKLKKEIL
HHHEEECCCEEEEEECCCEEEEEECCCCCCEEEECCCCCHHHHHCC
>Mature Secondary Structure
MNSKNIVAIGGGGFGRSLGSLEIEKYLISLINKKRPKICFIPTASGDSSLYKLNFYRAFS
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHHH
KLDCITSHIDFFSRTENLEEKILSQDIIYVGGGNTKSMLAVWKEWNLHNILQNAYEKGIV
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCEE
MSGVSAGAICWFDKGITDSFARELSILDCLGIVNDVACPHFDEEKEREPYVNDVIRREII
EECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHH
KSCICIEGNCALHIKNDVEYYSIDFGNGKNCFRISKENNKLKKEIL
HHHEEECCCEEEEEECCCEEEEEECCCCCCEEEECCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]