| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779363
Identifier: 78779363
GI number: 78779363
Start: 913308
End: 914273
Strand: Direct
Name: 78779363
Synonym: PMT9312_0979
Alternate gene names: NA
Gene position: 913308-914273 (Clockwise)
Preceding gene: 78779362
Following gene: 78779364
Centisome position: 53.43
GC content: 32.82
Gene sequence:
>966_bases ATGAGTTCAAACTTCAAAAACCTATACACATCGAATAATCCTCCTTTAGAAGCAATTTTAATGAGAGGCTCAAATATTGA GTCAATCCATAAAATTCATGCTGTTATTACGGACAAAAAAGGTAGGGTTTTAATGTGCGCAGGAAATCCAGAATATAAAA GTTTTATAAGATCAGCATTAAAACCTTTTCAGGCAATACCTTTTGTTAGTAGTGGAGCTGCATCAAAAATAAATAATGAT TCAAAATCAATTGCATTAGCATGCGGTTCACATAGTGGATCAAAACTTCATTCAAGGGAAGCCTTCAAAATATTATGGGA ATATGACATCGACATTAATAATCTGAAATGTCCAAAATCAAAGATAAGTCCTTTAGAACATAATTGTTCAGGCAAGCATG CTGCTTTTTTAGCTACATGCAAAAAAATGAATTGGCCATTAGATACCTACTTAAAGGGGAATCATCAACTTCAAATAGAA ATATTCAGAATTATTTCTGAATTACTTGAAATCCCAATATCTGAAATAAACGCAGAACGTGATGATTGTGGTGCCCCAAC TCTTTATTTAAAACTATTAGAAATGTCAAAATTATATTCACTTCTGAGCAGTTCCGACAATGCTGAATTAGAACAAATCA GTAGGGCGATGACAACTAACCCAATAATGATAAGCGACAACAATAAATTTGATACAGAAATAATTAAGGCATCCCATGGA CAAGTTATAGGTAAAGGTGGTGCAGAGGGAATACAATGCTTATGTAAGGTAAATGAAGGCATAGGACTTGCATTAAAAGT AGAAGATGGTTCAAAAAGAGCCAAGCATGCTGTTAGTCTTCATTTACTAAAACAGTTAGAGTGGATATCTGACTTAAGAA TTCACGACATAGAAGAAAAAGTGTTTAATTTTTCTGAAGGAGTACGAATTGAAGTTAAAGGTAAATTAAAATTCCAAGAA TCCTAA
Upstream 100 bases:
>100_bases TGAGGTAAAGCCTATTTTAAAAAATTTAATTCAAATTTTTTCTATTATTTCAGTAATAGCATTATCAGGAATTTTGCTTT TTCAATATAACAATTTCTAA
Downstream 100 bases:
>100_bases AGAAATAGAAAAAATTACTCTTTCAGATGTATGCTATATATATGTCGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTC ATAACCCGAAGGTCGGAAGT
Product: L-asparaginase II
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase II Protein; L-Asparaginase Rmolabile Subfamily; L-Asparaginase Rmolabile Family; Fumarate Lyase; Asparaginase-Related Protein
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSSNFKNLYTSNNPPLEAILMRGSNIESIHKIHAVITDKKGRVLMCAGNPEYKSFIRSALKPFQAIPFVSSGAASKINND SKSIALACGSHSGSKLHSREAFKILWEYDIDINNLKCPKSKISPLEHNCSGKHAAFLATCKKMNWPLDTYLKGNHQLQIE IFRIISELLEIPISEINAERDDCGAPTLYLKLLEMSKLYSLLSSSDNAELEQISRAMTTNPIMISDNNKFDTEIIKASHG QVIGKGGAEGIQCLCKVNEGIGLALKVEDGSKRAKHAVSLHLLKQLEWISDLRIHDIEEKVFNFSEGVRIEVKGKLKFQE S
Sequences:
>Translated_321_residues MSSNFKNLYTSNNPPLEAILMRGSNIESIHKIHAVITDKKGRVLMCAGNPEYKSFIRSALKPFQAIPFVSSGAASKINND SKSIALACGSHSGSKLHSREAFKILWEYDIDINNLKCPKSKISPLEHNCSGKHAAFLATCKKMNWPLDTYLKGNHQLQIE IFRIISELLEIPISEINAERDDCGAPTLYLKLLEMSKLYSLLSSSDNAELEQISRAMTTNPIMISDNNKFDTEIIKASHG QVIGKGGAEGIQCLCKVNEGIGLALKVEDGSKRAKHAVSLHLLKQLEWISDLRIHDIEEKVFNFSEGVRIEVKGKLKFQE S >Mature_320_residues SSNFKNLYTSNNPPLEAILMRGSNIESIHKIHAVITDKKGRVLMCAGNPEYKSFIRSALKPFQAIPFVSSGAASKINNDS KSIALACGSHSGSKLHSREAFKILWEYDIDINNLKCPKSKISPLEHNCSGKHAAFLATCKKMNWPLDTYLKGNHQLQIEI FRIISELLEIPISEINAERDDCGAPTLYLKLLEMSKLYSLLSSSDNAELEQISRAMTTNPIMISDNNKFDTEIIKASHGQ VIGKGGAEGIQCLCKVNEGIGLALKVEDGSKRAKHAVSLHLLKQLEWISDLRIHDIEEKVFNFSEGVRIEVKGKLKFQES
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35697; Mature: 35565
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNFKNLYTSNNPPLEAILMRGSNIESIHKIHAVITDKKGRVLMCAGNPEYKSFIRSAL CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHHH KPFQAIPFVSSGAASKINNDSKSIALACGSHSGSKLHSREAFKILWEYDIDINNLKCPKS HHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCEEEEEEEECCCCCCCCCCHH KISPLEHNCSGKHAAFLATCKKMNWPLDTYLKGNHQLQIEIFRIISELLEIPISEINAER HCCCCCCCCCCCHHHHHHHHHHCCCCHHHEECCCCEEEHHHHHHHHHHHHCCHHHCCCCC DDCGAPTLYLKLLEMSKLYSLLSSSDNAELEQISRAMTTNPIMISDNNKFDTEIIKASHG CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCC QVIGKGGAEGIQCLCKVNEGIGLALKVEDGSKRAKHAVSLHLLKQLEWISDLRIHDIEEK EEEECCCHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VFNFSEGVRIEVKGKLKFQES HHCCCCCCEEEEEEEEEECCC >Mature Secondary Structure SSNFKNLYTSNNPPLEAILMRGSNIESIHKIHAVITDKKGRVLMCAGNPEYKSFIRSAL CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHHH KPFQAIPFVSSGAASKINNDSKSIALACGSHSGSKLHSREAFKILWEYDIDINNLKCPKS HHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCEEEEEEEECCCCCCCCCCHH KISPLEHNCSGKHAAFLATCKKMNWPLDTYLKGNHQLQIEIFRIISELLEIPISEINAER HCCCCCCCCCCCHHHHHHHHHHCCCCHHHEECCCCEEEHHHHHHHHHHHHCCHHHCCCCC DDCGAPTLYLKLLEMSKLYSLLSSSDNAELEQISRAMTTNPIMISDNNKFDTEIIKASHG CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCC QVIGKGGAEGIQCLCKVNEGIGLALKVEDGSKRAKHAVSLHLLKQLEWISDLRIHDIEEK EEEECCCHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VFNFSEGVRIEVKGKLKFQES HHCCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA