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The map label for this gene is trpH [C]

Identifier: 78779304

GI number: 78779304

Start: 852828

End: 853475

Strand: Direct

Name: trpH [C]

Synonym: PMT9312_0920

Alternate gene names: 78779304

Gene position: 852828-853475 (Clockwise)

Preceding gene: 78779303

Following gene: 78779306

Centisome position: 49.9

GC content: 27.31

Gene sequence:

>648_bases
ATGAATAGGGAAGACTTAGTAAAATTAACTTCCAATATTAATAAAAATAGTTGTCCTAAAAATATTAATTTTCACTGTCA
TACAAAATTTAGTGATGGAAGTCTAGAACCATATGAACTTTTAGAACAAGCTTATAAAAATAACTTGAAATTTTTATCAA
TAACCGATCATCATACAATTAAAGCTCATGAATATATAAAAAAAAATAATTTACTCAAAAATTATCCTAAAGATTCTTTT
ACATTAATTTCGGGAATAGAAATTAATTGTTTGATTCTAGGATGTTTAGTACATGTAATTGGATTGGGAATAGATATAAA
AAGTAAATACCTAAATCCCTACATCCTTGGAGAGTCTCCAATAGGTAATGATTTAGATATTAAATCAGTTATTAAAGCAA
TAAATTTAGCTGATGGTTTATCATTTCTTGCACATCCAGCTAGATACAGGATTCCCTTTTATAAATTAATTCCAGAGGCC
AAAATACAAGGTATTGATGGAATAGAGGTTTGGTACGATTATGAACTGAATGAAGTATGGAATCCTAGTTTATTTGTATG
TACAGAAATAAATAAATTAGCAGATAAATATTCAATGCTAAAAACATGCGGAACAGATAGTCATGGACTTTCGCTATTAG
GTAGATAA

Upstream 100 bases:

>100_bases
AGTATTGCTACATGGAGCGTAGTTGGATTAATTATTTTCATGTTGGCTTCAATACAATTATATGCAAAGATTAGAAAGAA
AAATGAGAATTCATTAAGTA

Downstream 100 bases:

>100_bases
TTCAGAATTCGTTTTTTTCAATTATTGAATCAGTATTAATAATTATGTTCTTTAAATTTTCAATGACATCTGATGAACAA
TTATTCCACATTTTTCTATT

Product: phosphoesterase PHP-like

Products: NA

Alternate protein names: Phosphotransferase Domain-Containing Protein; PHP Domain Protein; PHP Family Metal-Dependent Phosphoesterase; Phosphoesterase PHP-Like; PHP Domain-Containing Protein; PHP-Like

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNREDLVKLTSNINKNSCPKNINFHCHTKFSDGSLEPYELLEQAYKNNLKFLSITDHHTIKAHEYIKKNNLLKNYPKDSF
TLISGIEINCLILGCLVHVIGLGIDIKSKYLNPYILGESPIGNDLDIKSVIKAINLADGLSFLAHPARYRIPFYKLIPEA
KIQGIDGIEVWYDYELNEVWNPSLFVCTEINKLADKYSMLKTCGTDSHGLSLLGR

Sequences:

>Translated_215_residues
MNREDLVKLTSNINKNSCPKNINFHCHTKFSDGSLEPYELLEQAYKNNLKFLSITDHHTIKAHEYIKKNNLLKNYPKDSF
TLISGIEINCLILGCLVHVIGLGIDIKSKYLNPYILGESPIGNDLDIKSVIKAINLADGLSFLAHPARYRIPFYKLIPEA
KIQGIDGIEVWYDYELNEVWNPSLFVCTEINKLADKYSMLKTCGTDSHGLSLLGR
>Mature_215_residues
MNREDLVKLTSNINKNSCPKNINFHCHTKFSDGSLEPYELLEQAYKNNLKFLSITDHHTIKAHEYIKKNNLLKNYPKDSF
TLISGIEINCLILGCLVHVIGLGIDIKSKYLNPYILGESPIGNDLDIKSVIKAINLADGLSFLAHPARYRIPFYKLIPEA
KIQGIDGIEVWYDYELNEVWNPSLFVCTEINKLADKYSMLKTCGTDSHGLSLLGR

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24387; Mature: 24387

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNREDLVKLTSNINKNSCPKNINFHCHTKFSDGSLEPYELLEQAYKNNLKFLSITDHHTI
CCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCEE
KAHEYIKKNNLLKNYPKDSFTLISGIEINCLILGCLVHVIGLGIDIKSKYLNPYILGESP
HHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEHHHCCCCEEECCCC
IGNDLDIKSVIKAINLADGLSFLAHPARYRIPFYKLIPEAKIQGIDGIEVWYDYELNEVW
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCHHHCCCCCCEEEEEEEECCCCC
NPSLFVCTEINKLADKYSMLKTCGTDSHGLSLLGR
CCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNREDLVKLTSNINKNSCPKNINFHCHTKFSDGSLEPYELLEQAYKNNLKFLSITDHHTI
CCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCEE
KAHEYIKKNNLLKNYPKDSFTLISGIEINCLILGCLVHVIGLGIDIKSKYLNPYILGESP
HHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEHHHCCCCEEECCCC
IGNDLDIKSVIKAINLADGLSFLAHPARYRIPFYKLIPEAKIQGIDGIEVWYDYELNEVW
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCHHHCCCCCCEEEEEEEECCCCC
NPSLFVCTEINKLADKYSMLKTCGTDSHGLSLLGR
CCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA