| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is leuS
Identifier: 78779295
GI number: 78779295
Start: 842621
End: 845191
Strand: Reverse
Name: leuS
Synonym: PMT9312_0911
Alternate gene names: 78779295
Gene position: 845191-842621 (Counterclockwise)
Preceding gene: 78779300
Following gene: 78779293
Centisome position: 49.45
GC content: 29.6
Gene sequence:
>2571_bases GTGATTTCTCCCGATAAACAATATGAGACAGATACCAATTTATATAATCCATCTGAAATAGAAAAAAAATGGCAGTCAAT ATGGACAGAAAACAATTTATACAAAACCGATGAATTAACTGAGAATAGCGATAAATTTTATGCTTTATCAATGTTTCCTT ACCCTTCAGGTAATCTTCATATGGGACATGTTAGGAATTATGTTATTACAGACTTAATAGCTCGTTTCCAAAGGTTTAAG GGAAAATCTGTTTTACATCCAATGGGTTGGGACGCTTTTGGTTTACCTGCTGAGAATGCAGCGATTGAAAGAGGAATTAG TCCAAGTGTCTGGACTAAAAAAAATATTTCTCATATGAAGTCACAATTAAAGCTTTTGGGACTATCAGTTGATTGGGATA GAGAATTTGCAACTTGTGATGAAAATTACTATATTTGGACACAATATCTATTTTTAGAGTTATACAAGGCAGGTCTTGTA TATCAAAAGGAATCAGAAGTTAATTGGGATCCGATAGATAATACAGTCTTAGCGAATGAACAAGTTGACTCAGAGGGTAA ATCTTGGAGATCTGGGGCGCTAGTTGAAAAAAAATTATTAAAGCAATGGTTTTTAAGGATTACTAATTATGCGGATGAGT TATTGAAGGATTTAGAAAAATTAGATAACTGGCCAGAAAGAGTAAAAATAATGCAAGATAATTGGATTGGAAAGTCAATT GGTACAAATATTAATTTCAATATCAATACCAATCCAGAAAAGAAAATAACTGTATTTACAACAAGGCCAGATACTTTATT TGGAGTTACTTATTTAGCAATTTCTATTAATCATTCATTAATTAAAAATATTTCAGATCAAGAAACCATACAAGATATAG AAAATCTTAAACAATATTTGAAAAATAATAAAAATAATGAACTTGAAAAAATTGGAATAAAAACTAGTTTAATAGCAATA AATCCAGTTAATTCAGAACCTATTCCTATTTGGGTGGCAAGTTATGTTCTCGATGAATACGGTACAGGTGCTGTTATGGG CGTGCCTGCTCATGATCTAAGAGATTTTGAATTTGCCAAGAAAAATAATATTGATATTAAACATGTAATAATAAAGGATA AAAGTGAAAAAACTAAAGAGCTTGATGAAGCTTATGTGGAAAATGGATATCTTATTAATTCAAATCATTTCAATGGTATA GCAAATACTATTGCTAAATTAAAAATTTCAGAGGAGGGCGTAAATAATGGATGGGCCGAAAATAAGATTCAATATCGTTT AAGAGATTGGTTAATATCTAGACAAAGATATTGGGGATGTCCGATTCCTATCGTTAATTGCAAAAAATGTGGATCTGTTC CTTTAAACCAATCGGAATTACCTGTTGCATTACCAAAAGATATAGATATCTCTGCTAACAAGATTAATGCTTTAGGTGAT AATTATAATTGGATAAATACAACATGTCCAAAATGTGGAATAGCGGCAAAAAAAGAAACTGATACTATGGACACTTTTAT GTGTTCATCTTGGTATTTTTTAAGATATCCATCGTCAAGATGTTCAACTAAGCCATTTGAAAAGATTGAAATTAATAATT GGTTGCCTGTAGATCAATATGTTGGAGGAGTAGAGCACGCAATCTTGCATTTGTTATATGCAAGATTTTTCACTAAAGCA TTGCGAGATAATGAACTATTTGAAATTGATGAACCATTCAAAAAGTTATTAACTCAAGGAATGGTTCAGTCCGCAGCCTA TAAAAACAATAAAACGGGTAAATATATTTCTCCTTCAGATATTAATGACCTATCAAATCCTACAGATCCAATTGACAACT CTAAACTCGAAGTGCTTTTCGAGAAGATGTCCAAGTCTAAATATAACGGAATAGATCCTGAATCAGTAATTAAAAAATAT GGAGCAGATACAGCAAGAATGTTTATATTATTTAAAGCACCACCAGAAAAAGATTTGGAATGGGGAGATTCAGATGTTGA AGGACAATTTAGATTTTTAAGTAGGATTTGGAAGCTTTATATAAGTTGTTCAAAAGATATCAATAGTAAAAGTAAGTCCT ATCCAAATAAAGAAAAAACTTTAATAAAGTCAATGAACATTGCTATAAAAGAAATTACAAATGACATATCAAATAACCAA TTTAATACAGCGATTTCAGAACTAATGAAGTTTTATAATTCATTATCAAATAACATTAATGACGTAAACAATAATTTAAA AATAGATGCTTTAAAAACATTTTGTATTTTATTGGCTCCATTTGCACCTCATATTTCTGAAGAAATATGGCTTCTTATAG GATTTAAAAATTCTGTTCATTTAGAACACTGGCCTTCATTTAATGCCGAAGCACTAAAAGAAGATTCATATGTACTAGTA ATACAAGTAAATGGAAAAGTTAGAGACAAAATAAATATTAATAATGAAATGAATGAAGATCAAATTAAGGAATTAACTCT TAAAAGACCCAATATATTAAAATGGACTCAAGATAAGGAAATAAGAAAAATAATTATTGTTAAAGGAAAAATTATGAATA TTGTTGTTTAA
Upstream 100 bases:
>100_bases TAATATATTTTAAATTTTAATTATAAATTATTCCTTTTAACAAACTATTTCTATTTTATACAATGGATATTAAAATAATA ATTTAACAAATAAAAAATAA
Downstream 100 bases:
>100_bases GAATTTCTTTTTTGAATAACTAATGAATTTGGATTTGACCAATCGCCCTTAACTAAATAATCTTCATTACCGAAACACAT TTCACGAAGTATGAAAAATA
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 856; Mature: 856
Protein sequence:
>856_residues MISPDKQYETDTNLYNPSEIEKKWQSIWTENNLYKTDELTENSDKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFK GKSVLHPMGWDAFGLPAENAAIERGISPSVWTKKNISHMKSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLV YQKESEVNWDPIDNTVLANEQVDSEGKSWRSGALVEKKLLKQWFLRITNYADELLKDLEKLDNWPERVKIMQDNWIGKSI GTNINFNINTNPEKKITVFTTRPDTLFGVTYLAISINHSLIKNISDQETIQDIENLKQYLKNNKNNELEKIGIKTSLIAI NPVNSEPIPIWVASYVLDEYGTGAVMGVPAHDLRDFEFAKKNNIDIKHVIIKDKSEKTKELDEAYVENGYLINSNHFNGI ANTIAKLKISEEGVNNGWAENKIQYRLRDWLISRQRYWGCPIPIVNCKKCGSVPLNQSELPVALPKDIDISANKINALGD NYNWINTTCPKCGIAAKKETDTMDTFMCSSWYFLRYPSSRCSTKPFEKIEINNWLPVDQYVGGVEHAILHLLYARFFTKA LRDNELFEIDEPFKKLLTQGMVQSAAYKNNKTGKYISPSDINDLSNPTDPIDNSKLEVLFEKMSKSKYNGIDPESVIKKY GADTARMFILFKAPPEKDLEWGDSDVEGQFRFLSRIWKLYISCSKDINSKSKSYPNKEKTLIKSMNIAIKEITNDISNNQ FNTAISELMKFYNSLSNNINDVNNNLKIDALKTFCILLAPFAPHISEEIWLLIGFKNSVHLEHWPSFNAEALKEDSYVLV IQVNGKVRDKININNEMNEDQIKELTLKRPNILKWTQDKEIRKIIIVKGKIMNIVV
Sequences:
>Translated_856_residues MISPDKQYETDTNLYNPSEIEKKWQSIWTENNLYKTDELTENSDKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFK GKSVLHPMGWDAFGLPAENAAIERGISPSVWTKKNISHMKSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLV YQKESEVNWDPIDNTVLANEQVDSEGKSWRSGALVEKKLLKQWFLRITNYADELLKDLEKLDNWPERVKIMQDNWIGKSI GTNINFNINTNPEKKITVFTTRPDTLFGVTYLAISINHSLIKNISDQETIQDIENLKQYLKNNKNNELEKIGIKTSLIAI NPVNSEPIPIWVASYVLDEYGTGAVMGVPAHDLRDFEFAKKNNIDIKHVIIKDKSEKTKELDEAYVENGYLINSNHFNGI ANTIAKLKISEEGVNNGWAENKIQYRLRDWLISRQRYWGCPIPIVNCKKCGSVPLNQSELPVALPKDIDISANKINALGD NYNWINTTCPKCGIAAKKETDTMDTFMCSSWYFLRYPSSRCSTKPFEKIEINNWLPVDQYVGGVEHAILHLLYARFFTKA LRDNELFEIDEPFKKLLTQGMVQSAAYKNNKTGKYISPSDINDLSNPTDPIDNSKLEVLFEKMSKSKYNGIDPESVIKKY GADTARMFILFKAPPEKDLEWGDSDVEGQFRFLSRIWKLYISCSKDINSKSKSYPNKEKTLIKSMNIAIKEITNDISNNQ FNTAISELMKFYNSLSNNINDVNNNLKIDALKTFCILLAPFAPHISEEIWLLIGFKNSVHLEHWPSFNAEALKEDSYVLV IQVNGKVRDKININNEMNEDQIKELTLKRPNILKWTQDKEIRKIIIVKGKIMNIVV >Mature_856_residues MISPDKQYETDTNLYNPSEIEKKWQSIWTENNLYKTDELTENSDKFYALSMFPYPSGNLHMGHVRNYVITDLIARFQRFK GKSVLHPMGWDAFGLPAENAAIERGISPSVWTKKNISHMKSQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLV YQKESEVNWDPIDNTVLANEQVDSEGKSWRSGALVEKKLLKQWFLRITNYADELLKDLEKLDNWPERVKIMQDNWIGKSI GTNINFNINTNPEKKITVFTTRPDTLFGVTYLAISINHSLIKNISDQETIQDIENLKQYLKNNKNNELEKIGIKTSLIAI NPVNSEPIPIWVASYVLDEYGTGAVMGVPAHDLRDFEFAKKNNIDIKHVIIKDKSEKTKELDEAYVENGYLINSNHFNGI ANTIAKLKISEEGVNNGWAENKIQYRLRDWLISRQRYWGCPIPIVNCKKCGSVPLNQSELPVALPKDIDISANKINALGD NYNWINTTCPKCGIAAKKETDTMDTFMCSSWYFLRYPSSRCSTKPFEKIEINNWLPVDQYVGGVEHAILHLLYARFFTKA LRDNELFEIDEPFKKLLTQGMVQSAAYKNNKTGKYISPSDINDLSNPTDPIDNSKLEVLFEKMSKSKYNGIDPESVIKKY GADTARMFILFKAPPEKDLEWGDSDVEGQFRFLSRIWKLYISCSKDINSKSKSYPNKEKTLIKSMNIAIKEITNDISNNQ FNTAISELMKFYNSLSNNINDVNNNLKIDALKTFCILLAPFAPHISEEIWLLIGFKNSVHLEHWPSFNAEALKEDSYVLV IQVNGKVRDKININNEMNEDQIKELTLKRPNILKWTQDKEIRKIIIVKGKIMNIVV
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=889, Percent_Identity=37.6827896512936, Blast_Score=610, Evalue=1e-174, Organism=Homo sapiens, GI268370297, Length=895, Percent_Identity=19.8882681564246, Blast_Score=113, Evalue=7e-25, Organism=Homo sapiens, GI268370293, Length=895, Percent_Identity=19.7765363128492, Blast_Score=113, Evalue=7e-25, Organism=Homo sapiens, GI268370295, Length=852, Percent_Identity=19.8356807511737, Blast_Score=103, Evalue=7e-22, Organism=Homo sapiens, GI5454158, Length=882, Percent_Identity=20.1814058956916, Blast_Score=99, Evalue=3e-20, Organism=Homo sapiens, GI46852147, Length=456, Percent_Identity=23.2456140350877, Blast_Score=82, Evalue=2e-15, Organism=Escherichia coli, GI1786861, Length=863, Percent_Identity=43.9165701042874, Blast_Score=721, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=196, Percent_Identity=30.6122448979592, Blast_Score=94, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71997510, Length=832, Percent_Identity=32.2115384615385, Blast_Score=393, Evalue=1e-109, Organism=Caenorhabditis elegans, GI71997517, Length=828, Percent_Identity=32.2463768115942, Blast_Score=392, Evalue=1e-109, Organism=Caenorhabditis elegans, GI212645227, Length=373, Percent_Identity=30.2949061662198, Blast_Score=166, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17510661, Length=866, Percent_Identity=22.0554272517321, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71980946, Length=183, Percent_Identity=26.775956284153, Blast_Score=71, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323414, Length=873, Percent_Identity=40.5498281786942, Blast_Score=619, Evalue=1e-178, Organism=Saccharomyces cerevisiae, GI6321531, Length=870, Percent_Identity=21.3793103448276, Blast_Score=109, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6325217, Length=145, Percent_Identity=31.0344827586207, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI21355409, Length=771, Percent_Identity=37.094682230869, Blast_Score=493, Evalue=1e-139, Organism=Drosophila melanogaster, GI17864482, Length=892, Percent_Identity=20.9641255605381, Blast_Score=111, Evalue=2e-24, Organism=Drosophila melanogaster, GI24653289, Length=892, Percent_Identity=20.9641255605381, Blast_Score=111, Evalue=2e-24,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 98667; Mature: 98667
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISPDKQYETDTNLYNPSEIEKKWQSIWTENNLYKTDELTENSDKFYALSMFPYPSGNLH CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEECCCCCCCEE MGHVRNYVITDLIARFQRFKGKSVLHPMGWDAFGLPAENAAIERGISPSVWTKKNISHMK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHH SQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLVYQKESEVNWDPIDNTVLANE HHHHHEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEECC QVDSEGKSWRSGALVEKKLLKQWFLRITNYADELLKDLEKLDNWPERVKIMQDNWIGKSI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHCCCCCHHH GTNINFNINTNPEKKITVFTTRPDTLFGVTYLAISINHSLIKNISDQETIQDIENLKQYL CCCEEEEECCCCCCEEEEEEECCCHHHEEEEEEEEECHHHHHCCCHHHHHHHHHHHHHHH KNNKNNELEKIGIKTSLIAINPVNSEPIPIWVASYVLDEYGTGAVMGVPAHDLRDFEFAK HCCCCCCHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCHHCCCCHHHH KNNIDIKHVIIKDKSEKTKELDEAYVENGYLINSNHFNGIANTIAKLKISEEGVNNGWAE CCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHEEECCCCCCCCCCH NKIQYRLRDWLISRQRYWGCPIPIVNCKKCGSVPLNQSELPVALPKDIDISANKINALGD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC NYNWINTTCPKCGIAAKKETDTMDTFMCSSWYFLRYPSSRCSTKPFEKIEINNWLPVDQY CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCEEECCCCCCHHHH VGGVEHAILHLLYARFFTKALRDNELFEIDEPFKKLLTQGMVQSAAYKNNKTGKYISPSD HCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCEECCCC INDLSNPTDPIDNSKLEVLFEKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKDLE CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCC WGDSDVEGQFRFLSRIWKLYISCSKDINSKSKSYPNKEKTLIKSMNIAIKEITNDISNNQ CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH FNTAISELMKFYNSLSNNINDVNNNLKIDALKTFCILLAPFAPHISEEIWLLIGFKNSVH HHHHHHHHHHHHHHHCCCHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC LEHWPSFNAEALKEDSYVLVIQVNGKVRDKININNEMNEDQIKELTLKRPNILKWTQDKE CCCCCCCCHHHHCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHCCCCCCEECCCCCC IRKIIIVKGKIMNIVV CEEEEEEECCEEEEEC >Mature Secondary Structure MISPDKQYETDTNLYNPSEIEKKWQSIWTENNLYKTDELTENSDKFYALSMFPYPSGNLH CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEECCCCCCCEE MGHVRNYVITDLIARFQRFKGKSVLHPMGWDAFGLPAENAAIERGISPSVWTKKNISHMK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHH SQLKLLGLSVDWDREFATCDENYYIWTQYLFLELYKAGLVYQKESEVNWDPIDNTVLANE HHHHHEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEECC QVDSEGKSWRSGALVEKKLLKQWFLRITNYADELLKDLEKLDNWPERVKIMQDNWIGKSI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHCCCCCHHH GTNINFNINTNPEKKITVFTTRPDTLFGVTYLAISINHSLIKNISDQETIQDIENLKQYL CCCEEEEECCCCCCEEEEEEECCCHHHEEEEEEEEECHHHHHCCCHHHHHHHHHHHHHHH KNNKNNELEKIGIKTSLIAINPVNSEPIPIWVASYVLDEYGTGAVMGVPAHDLRDFEFAK HCCCCCCHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCHHCCCCHHHH KNNIDIKHVIIKDKSEKTKELDEAYVENGYLINSNHFNGIANTIAKLKISEEGVNNGWAE CCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHEEECCCCCCCCCCH NKIQYRLRDWLISRQRYWGCPIPIVNCKKCGSVPLNQSELPVALPKDIDISANKINALGD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC NYNWINTTCPKCGIAAKKETDTMDTFMCSSWYFLRYPSSRCSTKPFEKIEINNWLPVDQY CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCEEECCCCCCHHHH VGGVEHAILHLLYARFFTKALRDNELFEIDEPFKKLLTQGMVQSAAYKNNKTGKYISPSD HCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCEECCCC INDLSNPTDPIDNSKLEVLFEKMSKSKYNGIDPESVIKKYGADTARMFILFKAPPEKDLE CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCC WGDSDVEGQFRFLSRIWKLYISCSKDINSKSKSYPNKEKTLIKSMNIAIKEITNDISNNQ CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH FNTAISELMKFYNSLSNNINDVNNNLKIDALKTFCILLAPFAPHISEEIWLLIGFKNSVH HHHHHHHHHHHHHHHCCCHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC LEHWPSFNAEALKEDSYVLVIQVNGKVRDKININNEMNEDQIKELTLKRPNILKWTQDKE CCCCCCCCHHHHCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHCCCCCCEECCCCCC IRKIIIVKGKIMNIVV CEEEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA