| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778864
Identifier: 78778864
GI number: 78778864
Start: 449015
End: 450124
Strand: Direct
Name: 78778864
Synonym: PMT9312_0479
Alternate gene names: NA
Gene position: 449015-450124 (Clockwise)
Preceding gene: 78778862
Following gene: 78778865
Centisome position: 26.27
GC content: 34.59
Gene sequence:
>1110_bases ATGAGCGATATATTGTTAATTGGTTCATGTGAGCCATTTAGTGGTAAGTCTGCATTGGTGCTTGGGATAGCAAAAAGAGT TTTACAGGAGAAAAAACAAGTACGTATTGGTAAACCACTAGCAACTTGTATCGAACTTACTAATCTACCTTCAATGTCTT ATGAAGGATTAATAGATGATGATGTTAAATTTATTGGATCTACTTTAAATATCAAAGAAGAGAATTTAATTTCTTCAGTA GGATTATTAGATAATATATCAGCTGAAAAAAGAATATTTAATAAAGACTTGCTTCCAGGAAAAGGTTTCGATCAAATTAA AGGATTGGTTAATGATTCTTTTGAAGGATTGAATATTCTTGAAGCGGCTGGTAGTCTTCATGAAGGTATGATTTATGGTT TAAGTCTCCCACAACTAGCTGAAAGCTTAGATGCGAAAGCCTTAATTGTAAATTTATGGGAAGATTGTAAAAGCGTAGAT GCATTACTAGATGCAAAAAAACAATTAGGGGAGCATTTGGCTGGAGTTGTATTGAATGCAGTTCCGCCTCAAGAAGTCGA AAAAGTTAAAAATGAAATAATACCTTCTCTTAAAGATTTGAATATTGAAGTATTTGGAGTGATGCCCAAGTCACCACTTC TCAGAAGTGTCACCGTCGGTGAGCTTGTAAGAAGACTAGATGCCAAAGTAATTTGTTGCCCTGAAAAAGATCAATTACTT GTTGAGACATTGAGTATTGGTGCAATGGGGGTAAATTCTGCAATGGAATTTTTCAGAAGAAGACGAAATATGGCTGTGGT TACTGGAGCTGATAGAACTGATATCCAACTTGCTGCTTTGGAAGCTTCTACTCAATGTTTAATTTTAACTGGTATGGGAG AACCCCTATCACAATTGATTCATAGAGCAGAAGAATTGGAGGTCCCAATTTTAAAGGTGGAATTAGATACTCTCGCCTCT GTAGAAATTATTGAACAAGCTTTTGGTCATGTAAGAATACATGAATCAATTAAAGCTTCTTATGCTGTTCAATTAGTTCA GGAGCATGTAAATCTAAAAAGAATTCTCGAAAAGATAGATTTTCCCTGCAATTTTCCAGAAAAATGCTAA
Upstream 100 bases:
>100_bases CCTAAAAAATATTTATTTGCTTAAAACTCATAAATAAATATTTGTTTAGTTCTAAAAAAAATATTATCTTGAACTTATGG ATAAATAACTTTACTAAATT
Downstream 100 bases:
>100_bases TTTCAAATATAGGAACAATTTTATTTTGAGTCGCTCATTAGATCTACCAGCAACAGAAGGCGTTGATGCCTTAGCTCAAG AACTTGCAAAACTCCAAGAT
Product: BioD-like N-terminal domain of phosphotransacetylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSDILLIGSCEPFSGKSALVLGIAKRVLQEKKQVRIGKPLATCIELTNLPSMSYEGLIDDDVKFIGSTLNIKEENLISSV GLLDNISAEKRIFNKDLLPGKGFDQIKGLVNDSFEGLNILEAAGSLHEGMIYGLSLPQLAESLDAKALIVNLWEDCKSVD ALLDAKKQLGEHLAGVVLNAVPPQEVEKVKNEIIPSLKDLNIEVFGVMPKSPLLRSVTVGELVRRLDAKVICCPEKDQLL VETLSIGAMGVNSAMEFFRRRRNMAVVTGADRTDIQLAALEASTQCLILTGMGEPLSQLIHRAEELEVPILKVELDTLAS VEIIEQAFGHVRIHESIKASYAVQLVQEHVNLKRILEKIDFPCNFPEKC
Sequences:
>Translated_369_residues MSDILLIGSCEPFSGKSALVLGIAKRVLQEKKQVRIGKPLATCIELTNLPSMSYEGLIDDDVKFIGSTLNIKEENLISSV GLLDNISAEKRIFNKDLLPGKGFDQIKGLVNDSFEGLNILEAAGSLHEGMIYGLSLPQLAESLDAKALIVNLWEDCKSVD ALLDAKKQLGEHLAGVVLNAVPPQEVEKVKNEIIPSLKDLNIEVFGVMPKSPLLRSVTVGELVRRLDAKVICCPEKDQLL VETLSIGAMGVNSAMEFFRRRRNMAVVTGADRTDIQLAALEASTQCLILTGMGEPLSQLIHRAEELEVPILKVELDTLAS VEIIEQAFGHVRIHESIKASYAVQLVQEHVNLKRILEKIDFPCNFPEKC >Mature_368_residues SDILLIGSCEPFSGKSALVLGIAKRVLQEKKQVRIGKPLATCIELTNLPSMSYEGLIDDDVKFIGSTLNIKEENLISSVG LLDNISAEKRIFNKDLLPGKGFDQIKGLVNDSFEGLNILEAAGSLHEGMIYGLSLPQLAESLDAKALIVNLWEDCKSVDA LLDAKKQLGEHLAGVVLNAVPPQEVEKVKNEIIPSLKDLNIEVFGVMPKSPLLRSVTVGELVRRLDAKVICCPEKDQLLV ETLSIGAMGVNSAMEFFRRRRNMAVVTGADRTDIQLAALEASTQCLILTGMGEPLSQLIHRAEELEVPILKVELDTLASV EIIEQAFGHVRIHESIKASYAVQLVQEHVNLKRILEKIDFPCNFPEKC
Specific function: Unknown
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.fulgidus AF1212 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010766 [H]
Pfam domain/function: PF01656 CbiA; PF07085 DRTGG [H]
EC number: NA
Molecular weight: Translated: 40470; Mature: 40339
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDILLIGSCEPFSGKSALVLGIAKRVLQEKKQVRIGKPLATCIELTNLPSMSYEGLIDD CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCH DVKFIGSTLNIKEENLISSVGLLDNISAEKRIFNKDLLPGKGFDQIKGLVNDSFEGLNIL HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHH EAAGSLHEGMIYGLSLPQLAESLDAKALIVNLWEDCKSVDALLDAKKQLGEHLAGVVLNA HHHCCHHCCEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPPQEVEKVKNEIIPSLKDLNIEVFGVMPKSPLLRSVTVGELVRRLDAKVICCPEKDQLL CCHHHHHHHHHHHCCCHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHH VETLSIGAMGVNSAMEFFRRRRNMAVVTGADRTDIQLAALEASTQCLILTGMGEPLSQLI HHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCEEEEECCCHHHHHHH HRAEELEVPILKVELDTLASVEIIEQAFGHVRIHESIKASYAVQLVQEHVNLKRILEKID HHHHHCCCCEEEEEHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC FPCNFPEKC CCCCCCCCC >Mature Secondary Structure SDILLIGSCEPFSGKSALVLGIAKRVLQEKKQVRIGKPLATCIELTNLPSMSYEGLIDD CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCH DVKFIGSTLNIKEENLISSVGLLDNISAEKRIFNKDLLPGKGFDQIKGLVNDSFEGLNIL HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHH EAAGSLHEGMIYGLSLPQLAESLDAKALIVNLWEDCKSVDALLDAKKQLGEHLAGVVLNA HHHCCHHCCEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPPQEVEKVKNEIIPSLKDLNIEVFGVMPKSPLLRSVTVGELVRRLDAKVICCPEKDQLL CCHHHHHHHHHHHCCCHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHH VETLSIGAMGVNSAMEFFRRRRNMAVVTGADRTDIQLAALEASTQCLILTGMGEPLSQLI HHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCEEEEECCCHHHHHHH HRAEELEVPILKVELDTLASVEIIEQAFGHVRIHESIKASYAVQLVQEHVNLKRILEKID HHHHHCCCCEEEEEHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC FPCNFPEKC CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]