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The map label for this gene is ycgO [C]

Identifier: 78778857

GI number: 78778857

Start: 443174

End: 444373

Strand: Direct

Name: ycgO [C]

Synonym: PMT9312_0472

Alternate gene names: 78778857

Gene position: 443174-444373 (Clockwise)

Preceding gene: 78778856

Following gene: 78778862

Centisome position: 25.93

GC content: 37.83

Gene sequence:

>1200_bases
ATGACGCCTGAAAGGCTTGGATTACTTTGGGGAATAACTGTATTCGCAGGTGCTTGTGCTCGATTATTTTCTTCTTTTAC
AGGATTCCCAAGTGTTGTTATTTTGTTGCTTTCTGGATTATTCATCGGAAGATCAGGTTTAGGACTGGTTGAGCCTTTAG
ATCTCGGACAAGGGCTAGAAACTATTGTAGGGCTTTTAGTCTGTTTGGTTTTATTTGAAGGGGGATTAAATTTAAAATTG
CCTGAGGGGAATATAAGAAATACTGTTTTAAAAATCTCATTGGTAAGACTTTTTATTTCATTATCAGCTGGAATTTTTAT
TGCTCATTGGCTAGCAGGCCTTTCATGGCAAGTCGCAGGAATATATAGTGCAATAGTTCTAGCTACTGGCCCCACAGTGG
TTTCTCCATTAGTTGAACAAATAAAATTAGCTTCCCCTCTTTCAGAAGTTTTAAAAGCTGAGGGGTTGTTACTTGAACCA
ATTGGTGCAGTATTAGCACTATTACTTTTAGAACTAACTTTAGGGGACCTACGTGGGATTAACGATGTATTTATTGCATT
AATGCAAAGATTAGGGGGAGGAGTTCTAATCGGATTAACTGCGGGATGGTTACTATCAGAAATTTTAAAAAAAATAAAAA
ATGAAGCCTCATTTGGCATAGAGCTTCAAGTTACCCTTGGATTTATTTTCCTTGTGTATGGAATTTGTGAATATTTTTTG
CCAGAATCAGGCTTGCCTGCTTCTGTCGCAGCAGGTTTTATTGTGGGCAAAAGAGAAGTAATAGATAAGGATAGATTGGA
TAATTTAATAGGTGAATTAGCTCAATTAGCAATTACAGTTCTTTTCCCTCTTTTGGCAGCTGATGTTTCTTGGAGTGAAT
TAAGTCCGCTAGGTTGGGGAGGGGTTATTTGCGTTTTTATGTTGATGGTCATTGTTCGTCCTATCTCTATCTGGATAGCA
ACAATGGGAAGAGAATTAGACTTAAAAGAAAAAGTATTTTTAGCCTGGTTAGCCCCAAGAGGTATTGTTACTGCAGCTGT
AGCCTCTCTTTTTTCTATCAGATTAGAACAGGCTGGCATCCTTGGAGCTGGACGTCTTCAAGGTTTAGTGTTTCTTACTA
TATTAATGACGGTAGGAATCCAAGGCCTTACAGCTAAACCTTTGGTAAATCGGCTTGAATTAGGCCAAAAAAAAAATTAG

Upstream 100 bases:

>100_bases
GCTGATTACTTAAATTAAAAAGTATTGTATTTAATGGACTTGCGATAAGATTATTGATTTAATCAAAATAATTAATATTT
TTATTATTTATTAAGTTTAT

Downstream 100 bases:

>100_bases
ATTGATTTAAGACATCTTTCAATTCTTGATATATCACTTTTACTCTCAGAGAAAAGTTCCCAACTTTGAATTAAATCTGG
CCCACTGAGAGAACCAAAAA

Product: CPA1 family Na+/H+ antiporter

Products: NA

Alternate protein names: MjNhaP2 [H]

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTPERLGLLWGITVFAGACARLFSSFTGFPSVVILLLSGLFIGRSGLGLVEPLDLGQGLETIVGLLVCLVLFEGGLNLKL
PEGNIRNTVLKISLVRLFISLSAGIFIAHWLAGLSWQVAGIYSAIVLATGPTVVSPLVEQIKLASPLSEVLKAEGLLLEP
IGAVLALLLLELTLGDLRGINDVFIALMQRLGGGVLIGLTAGWLLSEILKKIKNEASFGIELQVTLGFIFLVYGICEYFL
PESGLPASVAAGFIVGKREVIDKDRLDNLIGELAQLAITVLFPLLAADVSWSELSPLGWGGVICVFMLMVIVRPISIWIA
TMGRELDLKEKVFLAWLAPRGIVTAAVASLFSIRLEQAGILGAGRLQGLVFLTILMTVGIQGLTAKPLVNRLELGQKKN

Sequences:

>Translated_399_residues
MTPERLGLLWGITVFAGACARLFSSFTGFPSVVILLLSGLFIGRSGLGLVEPLDLGQGLETIVGLLVCLVLFEGGLNLKL
PEGNIRNTVLKISLVRLFISLSAGIFIAHWLAGLSWQVAGIYSAIVLATGPTVVSPLVEQIKLASPLSEVLKAEGLLLEP
IGAVLALLLLELTLGDLRGINDVFIALMQRLGGGVLIGLTAGWLLSEILKKIKNEASFGIELQVTLGFIFLVYGICEYFL
PESGLPASVAAGFIVGKREVIDKDRLDNLIGELAQLAITVLFPLLAADVSWSELSPLGWGGVICVFMLMVIVRPISIWIA
TMGRELDLKEKVFLAWLAPRGIVTAAVASLFSIRLEQAGILGAGRLQGLVFLTILMTVGIQGLTAKPLVNRLELGQKKN
>Mature_398_residues
TPERLGLLWGITVFAGACARLFSSFTGFPSVVILLLSGLFIGRSGLGLVEPLDLGQGLETIVGLLVCLVLFEGGLNLKLP
EGNIRNTVLKISLVRLFISLSAGIFIAHWLAGLSWQVAGIYSAIVLATGPTVVSPLVEQIKLASPLSEVLKAEGLLLEPI
GAVLALLLLELTLGDLRGINDVFIALMQRLGGGVLIGLTAGWLLSEILKKIKNEASFGIELQVTLGFIFLVYGICEYFLP
ESGLPASVAAGFIVGKREVIDKDRLDNLIGELAQLAITVLFPLLAADVSWSELSPLGWGGVICVFMLMVIVRPISIWIAT
MGRELDLKEKVFLAWLAPRGIVTAAVASLFSIRLEQAGILGAGRLQGLVFLTILMTVGIQGLTAKPLVNRLELGQKKN

Specific function: This is probably a Na(+)/H(+) antiporter [H]

COG id: COG0025

COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153 [H]

Pfam domain/function: PF00999 Na_H_Exchanger [H]

EC number: NA

Molecular weight: Translated: 42570; Mature: 42439

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPERLGLLWGITVFAGACARLFSSFTGFPSVVILLLSGLFIGRSGLGLVEPLDLGQGLE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHH
TIVGLLVCLVLFEGGLNLKLPEGNIRNTVLKISLVRLFISLSAGIFIAHWLAGLSWQVAG
HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IYSAIVLATGPTVVSPLVEQIKLASPLSEVLKAEGLLLEPIGAVLALLLLELTLGDLRGI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCH
NDVFIALMQRLGGGVLIGLTAGWLLSEILKKIKNEASFGIELQVTLGFIFLVYGICEYFL
HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHC
PESGLPASVAAGFIVGKREVIDKDRLDNLIGELAQLAITVLFPLLAADVSWSELSPLGWG
CCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCH
GVICVFMLMVIVRPISIWIATMGRELDLKEKVFLAWLAPRGIVTAAVASLFSIRLEQAGI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
LGAGRLQGLVFLTILMTVGIQGLTAKPLVNRLELGQKKN
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TPERLGLLWGITVFAGACARLFSSFTGFPSVVILLLSGLFIGRSGLGLVEPLDLGQGLE
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHH
TIVGLLVCLVLFEGGLNLKLPEGNIRNTVLKISLVRLFISLSAGIFIAHWLAGLSWQVAG
HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IYSAIVLATGPTVVSPLVEQIKLASPLSEVLKAEGLLLEPIGAVLALLLLELTLGDLRGI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCH
NDVFIALMQRLGGGVLIGLTAGWLLSEILKKIKNEASFGIELQVTLGFIFLVYGICEYFL
HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHC
PESGLPASVAAGFIVGKREVIDKDRLDNLIGELAQLAITVLFPLLAADVSWSELSPLGWG
CCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCH
GVICVFMLMVIVRPISIWIATMGRELDLKEKVFLAWLAPRGIVTAAVASLFSIRLEQAGI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
LGAGRLQGLVFLTILMTVGIQGLTAKPLVNRLELGQKKN
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]