Click here to switch to the map view.

The map label for this gene is gcp [H]

Identifier: 78778855

GI number: 78778855

Start: 441763

End: 442833

Strand: Direct

Name: gcp [H]

Synonym: PMT9312_0470

Alternate gene names: 78778855

Gene position: 441763-442833 (Clockwise)

Preceding gene: 78778852

Following gene: 78778856

Centisome position: 25.85

GC content: 34.92

Gene sequence:

>1071_bases
ATGCGTAAAGTTTTAGCTATTGAAACAAGTTGTGATGAGACATCTGTCTCAATAGTTTCTAATATTGGCAATACTTTTAA
AATTCATTCAAATATCATTGCATCTCAAATTGAAGATCATTCAAAATGGGGAGGAGTTGTTCCTGAACTTGCAGCTAGAA
AGCATCTAGAGTTATTACCTTTTGTTTTAGAAAAGGCTTTAACAGAATCAAAAATCAAAATTGAGGAAGTAGATTATATT
GCATCAACTGTAGCTCCTGGATTAGTTGGGTGTTTACGAGTTGGCTCTATAACTGCAAGGTCACTTTGCATGTTACATTC
AAAGCCATTTTTGGGAATTCATCATTTGGAGGGGCATTTATCTTCAATTTTATTCTCAGAAAACTATCCAAAGAAATCTT
TTCTTACATTACTCGTTAGCGGTGGACATACTGAATTGATAAAGGTTGATGATAGAAGGGGAATGCAAAGACTTGGCAAA
AGTTTTGATGATGCCGCTGGAGAAGCCTTTGATAAAGTTGGAAGATTATTAGGTCTTAGTTATCCCGGAGGACCGGCAAT
TGAAAAGATTGCTAAAAATGGAGATCCTATGAAATTCAATTTACCAAAATGTAGAATTTCCGATAAAAAGGGTGGATTTC
TTAAATATGATTTCTCTTTTAGTGGTCTAAAAACTGCTGTATTAAGATTAGTTGAGAAAATAAATTTAGATGGGAAGACT
GTACCAGTTCCTGATATCGCTGCAAGTTTTGAAAGAGTAGTTGCAGAGGTCTTGGTTGAGAGAACTATAAGATGTGCTGA
AGATCATAGCTTGGATAATGTTGTTGTAGTTGGGGGAGTGGCTGCTAATAATACATTAAGAAAAATGATGATTAGTGAAG
CTAATAAAAAATCTATTAAAGTTCACTTAGCTCCTCTTAATCTTTGTACAGATAATGCGGCGATGATCGGTGCAGCGGCG
TTGTTCAGGATCAAATTTAAGGATCATTTAAGTTCCCTTAAATTAGGTGTCTCAGGAAGACTATCAATTGAACAAGCAAA
TACCCTTTATGAAGAAAATCCTCCTTTCTAA

Upstream 100 bases:

>100_bases
GTTATGATTGAAAAAAAGAATTTCATAAGTTGCAATCTTTAATTCCTTATAGTGTGTTAATTAAGAAATTAATATTAAAA
TAGAACAAGTTGAATCAAAT

Downstream 100 bases:

>100_bases
CTCCAATGAACAAACAATCTAAAATCGAGATTAAAGAGAAAAAAAACTTCGTTGATAAAAATGAACTTAATTTGTGGAAA
AGAGGTTTTACTCCTCAAGC

Product: putative DNA-binding/iron metalloprotein/AP endonuclease

Products: NA

Alternate protein names: Glycoprotease [H]

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRKVLAIETSCDETSVSIVSNIGNTFKIHSNIIASQIEDHSKWGGVVPELAARKHLELLPFVLEKALTESKIKIEEVDYI
ASTVAPGLVGCLRVGSITARSLCMLHSKPFLGIHHLEGHLSSILFSENYPKKSFLTLLVSGGHTELIKVDDRRGMQRLGK
SFDDAAGEAFDKVGRLLGLSYPGGPAIEKIAKNGDPMKFNLPKCRISDKKGGFLKYDFSFSGLKTAVLRLVEKINLDGKT
VPVPDIAASFERVVAEVLVERTIRCAEDHSLDNVVVVGGVAANNTLRKMMISEANKKSIKVHLAPLNLCTDNAAMIGAAA
LFRIKFKDHLSSLKLGVSGRLSIEQANTLYEENPPF

Sequences:

>Translated_356_residues
MRKVLAIETSCDETSVSIVSNIGNTFKIHSNIIASQIEDHSKWGGVVPELAARKHLELLPFVLEKALTESKIKIEEVDYI
ASTVAPGLVGCLRVGSITARSLCMLHSKPFLGIHHLEGHLSSILFSENYPKKSFLTLLVSGGHTELIKVDDRRGMQRLGK
SFDDAAGEAFDKVGRLLGLSYPGGPAIEKIAKNGDPMKFNLPKCRISDKKGGFLKYDFSFSGLKTAVLRLVEKINLDGKT
VPVPDIAASFERVVAEVLVERTIRCAEDHSLDNVVVVGGVAANNTLRKMMISEANKKSIKVHLAPLNLCTDNAAMIGAAA
LFRIKFKDHLSSLKLGVSGRLSIEQANTLYEENPPF
>Mature_356_residues
MRKVLAIETSCDETSVSIVSNIGNTFKIHSNIIASQIEDHSKWGGVVPELAARKHLELLPFVLEKALTESKIKIEEVDYI
ASTVAPGLVGCLRVGSITARSLCMLHSKPFLGIHHLEGHLSSILFSENYPKKSFLTLLVSGGHTELIKVDDRRGMQRLGK
SFDDAAGEAFDKVGRLLGLSYPGGPAIEKIAKNGDPMKFNLPKCRISDKKGGFLKYDFSFSGLKTAVLRLVEKINLDGKT
VPVPDIAASFERVVAEVLVERTIRCAEDHSLDNVVVVGGVAANNTLRKMMISEANKKSIKVHLAPLNLCTDNAAMIGAAA
LFRIKFKDHLSSLKLGVSGRLSIEQANTLYEENPPF

Specific function: Could Be A Metalloprotease. [C]

COG id: COG0533

COG function: function code O; Metal-dependent proteases with possible chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Homo sapiens, GI116812636, Length=343, Percent_Identity=34.9854227405248, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI8923380, Length=358, Percent_Identity=27.9329608938547, Blast_Score=119, Evalue=4e-27,
Organism=Escherichia coli, GI1789445, Length=338, Percent_Identity=41.1242603550296, Blast_Score=243, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17557464, Length=343, Percent_Identity=31.1953352769679, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71995670, Length=365, Percent_Identity=26.8493150684932, Blast_Score=100, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6320099, Length=346, Percent_Identity=30.635838150289, Blast_Score=117, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6322891, Length=300, Percent_Identity=29, Blast_Score=99, Evalue=7e-22,
Organism=Drosophila melanogaster, GI20129063, Length=340, Percent_Identity=31.4705882352941, Blast_Score=150, Evalue=9e-37,
Organism=Drosophila melanogaster, GI21357207, Length=335, Percent_Identity=28.3582089552239, Blast_Score=111, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022450
- InterPro:   IPR000905
- InterPro:   IPR017861 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: =3.4.24.57 [H]

Molecular weight: Translated: 38803; Mature: 38803

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVLAIETSCDETSVSIVSNIGNTFKIHSNIIASQIEDHSKWGGVVPELAARKHLELLP
CCCEEEEECCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FVLEKALTESKIKIEEVDYIASTVAPGLVGCLRVGSITARSLCMLHSKPFLGIHHLEGHL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH
SSILFSENYPKKSFLTLLVSGGHTELIKVDDRRGMQRLGKSFDDAAGEAFDKVGRLLGLS
HHHHHCCCCCCHHEEEEEEECCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
YPGGPAIEKIAKNGDPMKFNLPKCRISDKKGGFLKYDFSFSGLKTAVLRLVEKINLDGKT
CCCCHHHHHHHCCCCCEEEECCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCC
VPVPDIAASFERVVAEVLVERTIRCAEDHSLDNVVVVGGVAANNTLRKMMISEANKKSIK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEE
VHLAPLNLCTDNAAMIGAAALFRIKFKDHLSSLKLGVSGRLSIEQANTLYEENPPF
EEEEEEEECCCCHHHHHHHHHEEEHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKVLAIETSCDETSVSIVSNIGNTFKIHSNIIASQIEDHSKWGGVVPELAARKHLELLP
CCCEEEEECCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FVLEKALTESKIKIEEVDYIASTVAPGLVGCLRVGSITARSLCMLHSKPFLGIHHLEGHL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH
SSILFSENYPKKSFLTLLVSGGHTELIKVDDRRGMQRLGKSFDDAAGEAFDKVGRLLGLS
HHHHHCCCCCCHHEEEEEEECCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
YPGGPAIEKIAKNGDPMKFNLPKCRISDKKGGFLKYDFSFSGLKTAVLRLVEKINLDGKT
CCCCHHHHHHHCCCCCEEEECCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCC
VPVPDIAASFERVVAEVLVERTIRCAEDHSLDNVVVVGGVAANNTLRKMMISEANKKSIK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEE
VHLAPLNLCTDNAAMIGAAALFRIKFKDHLSSLKLGVSGRLSIEQANTLYEENPPF
EEEEEEEECCCCHHHHHHHHHEEEHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA