| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778823
Identifier: 78778823
GI number: 78778823
Start: 414254
End: 415411
Strand: Direct
Name: 78778823
Synonym: PMT9312_0438
Alternate gene names: NA
Gene position: 414254-415411 (Clockwise)
Preceding gene: 78778822
Following gene: 78778824
Centisome position: 24.24
GC content: 33.68
Gene sequence:
>1158_bases ATGTATAGTACAGAATTAGGGATAAATCTTTTTGGAAGTGAATCCAATAAAAAAATACAACTCAACAGAATAAAGATACT CCAAAAGAAAATAAATAATTTCAAAATATTTCTTGTAATTGCAGGCACTAATACATCTCAAATTAAAGGAATTTCTGCTG CAGGTATTAATGCAAAATCTAGGAGAATAACTGCGCTGGCAGATGCCGAATTTTTGCTTAAGGGTGCTTCAAAAGATCAT AAATATAAATTACCTCGTCTTAATGCAGGAGTAACTCCGGCCCTAATAAGTCATGTTTGTTCAAAGCTTATAAATGTTTA TCCAGTTATTGTTCCTTTGGGAATAGGAGTAAGGCCTTACTTTAATCATTTGGTTGTAGAAGATAGGGATTTGGGACCAT CAAATTGTCTTACTACTGGTAAATCTATGACTAAAGAGAGAGTTTTAAATCTCTATGAGAAAGGTCTTGCGATAGGAAAA TCTTCAAAACAACCCATTTTAATTTCTGAATCTGTCCCAGGGGGTACCACAACTGCTCAGGCAGTAATGGAAGCTTTTGG TTTGCGGGTATCTAATTTAGTAGGAAGTAGTTTATTTAAAGCCCCAAGAGAACTGAGAAGAAAAGTAGTTCAAAAAGGAC TTTTAAATGCAAATCTCAAGACTGATTTTGACTCTTTTGATGTTGTCGCATCAGTGGGAGATCCTTTTCAAGCTTTCTCA ATGGGTTTATTAATTGGTGCCAGGTTGGCGAACCAACCTGTCATATTATCTGGTGGAAGTCAAATGCTAGCTGTCATTTT GCTTGTATTAGAATTCTTAGGTGAAAAAAATAAAGATGACTTTATTGAGGATGTTTTTATTGCAACAACTGGGTGGCTTG TAAAAGATAATTCTCTAAATGATTTATTAAATTTAATAAATGAGAAATATGATGCCAACTTATTAGGTTTAGCAAGCCCT TTAAATTTCCAATCGTCAATATACAAAGAATTGATGGATTATGAATTGGGTCATGTAAAAGAAGGTGTTGGCGCTGGTGG AATATCAATTCTTGCTTTCCTAAATGGATTTAAAAATAAAGAAATAGTTTCATTGTGTCAACAAAATCTGGAAATAATGA AGGGTCTAGGTCAAATTTCTTTAGAGAAGGATTGCTGA
Upstream 100 bases:
>100_bases GTTGCCTATTCTCTTTTCCCAAGATTAAAATTAACTATCCCAGATCCTCCAAGATTATTAAATACTCTAGTTGATTTAAA TCATTGATAAAGAAATAAGA
Downstream 100 bases:
>100_bases ATGTTATCAAAATTTGCAACCAGAAGAGAATTTTTAAATTGTGGTAAGCTTTCGCTTTTATTTCTCTTAAACTCTTGCAG TAATCTTCCTAATAAAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MYSTELGINLFGSESNKKIQLNRIKILQKKINNFKIFLVIAGTNTSQIKGISAAGINAKSRRITALADAEFLLKGASKDH KYKLPRLNAGVTPALISHVCSKLINVYPVIVPLGIGVRPYFNHLVVEDRDLGPSNCLTTGKSMTKERVLNLYEKGLAIGK SSKQPILISESVPGGTTTAQAVMEAFGLRVSNLVGSSLFKAPRELRRKVVQKGLLNANLKTDFDSFDVVASVGDPFQAFS MGLLIGARLANQPVILSGGSQMLAVILLVLEFLGEKNKDDFIEDVFIATTGWLVKDNSLNDLLNLINEKYDANLLGLASP LNFQSSIYKELMDYELGHVKEGVGAGGISILAFLNGFKNKEIVSLCQQNLEIMKGLGQISLEKDC
Sequences:
>Translated_385_residues MYSTELGINLFGSESNKKIQLNRIKILQKKINNFKIFLVIAGTNTSQIKGISAAGINAKSRRITALADAEFLLKGASKDH KYKLPRLNAGVTPALISHVCSKLINVYPVIVPLGIGVRPYFNHLVVEDRDLGPSNCLTTGKSMTKERVLNLYEKGLAIGK SSKQPILISESVPGGTTTAQAVMEAFGLRVSNLVGSSLFKAPRELRRKVVQKGLLNANLKTDFDSFDVVASVGDPFQAFS MGLLIGARLANQPVILSGGSQMLAVILLVLEFLGEKNKDDFIEDVFIATTGWLVKDNSLNDLLNLINEKYDANLLGLASP LNFQSSIYKELMDYELGHVKEGVGAGGISILAFLNGFKNKEIVSLCQQNLEIMKGLGQISLEKDC >Mature_385_residues MYSTELGINLFGSESNKKIQLNRIKILQKKINNFKIFLVIAGTNTSQIKGISAAGINAKSRRITALADAEFLLKGASKDH KYKLPRLNAGVTPALISHVCSKLINVYPVIVPLGIGVRPYFNHLVVEDRDLGPSNCLTTGKSMTKERVLNLYEKGLAIGK SSKQPILISESVPGGTTTAQAVMEAFGLRVSNLVGSSLFKAPRELRRKVVQKGLLNANLKTDFDSFDVVASVGDPFQAFS MGLLIGARLANQPVILSGGSQMLAVILLVLEFLGEKNKDDFIEDVFIATTGWLVKDNSLNDLLNLINEKYDANLLGLASP LNFQSSIYKELMDYELGHVKEGVGAGGISILAFLNGFKNKEIVSLCQQNLEIMKGLGQISLEKDC
Specific function: Unknown
COG id: COG2038
COG function: function code H; NaMN:DMB phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0284 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y438_PROM9 (Q31C96)
Other databases:
- EMBL: CP000111 - RefSeq: YP_396935.1 - ProteinModelPortal: Q31C96 - STRING: Q31C96 - GeneID: 3765235 - GenomeReviews: CP000111_GR - KEGG: pmi:PMT9312_0438 - eggNOG: COG2038 - HOGENOM: HBG497525 - OMA: QMLAVYA - ProtClustDB: PRK04447 - BioCyc: PMAR74546:PMT9312_0438-MONOMER - HAMAP: MF_01086 - InterPro: IPR003200 - InterPro: IPR002805
Pfam domain/function: PF02277 DBI_PRT; SSF52733 NN:DBI_PRT
EC number: NA
Molecular weight: Translated: 41844; Mature: 41844
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSTELGINLFGSESNKKIQLNRIKILQKKINNFKIFLVIAGTNTSQIKGISAAGINAKS CCCCCCCCEEECCCCCCEEEHHHHHHHHHHHCCEEEEEEEECCCCHHHCCCEECCCCCCC RRITALADAEFLLKGASKDHKYKLPRLNAGVTPALISHVCSKLINVYPVIVPLGIGVRPY CEEEEEHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH FNHLVVEDRDLGPSNCLTTGKSMTKERVLNLYEKGLAIGKSSKQPILISESVPGGTTTAQ HCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHH AVMEAFGLRVSNLVGSSLFKAPRELRRKVVQKGLLNANLKTDFDSFDVVASVGDPFQAFS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHH MGLLIGARLANQPVILSGGSQMLAVILLVLEFLGEKNKDDFIEDVFIATTGWLVKDNSLN HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCHH DLLNLINEKYDANLLGLASPLNFQSSIYKELMDYELGHVKEGVGAGGISILAFLNGFKNK HHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCH EIVSLCQQNLEIMKGLGQISLEKDC HHHHHHHHHHHHHHCCCCCEECCCC >Mature Secondary Structure MYSTELGINLFGSESNKKIQLNRIKILQKKINNFKIFLVIAGTNTSQIKGISAAGINAKS CCCCCCCCEEECCCCCCEEEHHHHHHHHHHHCCEEEEEEEECCCCHHHCCCEECCCCCCC RRITALADAEFLLKGASKDHKYKLPRLNAGVTPALISHVCSKLINVYPVIVPLGIGVRPY CEEEEEHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH FNHLVVEDRDLGPSNCLTTGKSMTKERVLNLYEKGLAIGKSSKQPILISESVPGGTTTAQ HCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHH AVMEAFGLRVSNLVGSSLFKAPRELRRKVVQKGLLNANLKTDFDSFDVVASVGDPFQAFS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHH MGLLIGARLANQPVILSGGSQMLAVILLVLEFLGEKNKDDFIEDVFIATTGWLVKDNSLN HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCHH DLLNLINEKYDANLLGLASPLNFQSSIYKELMDYELGHVKEGVGAGGISILAFLNGFKNK HHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCH EIVSLCQQNLEIMKGLGQISLEKDC HHHHHHHHHHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA