| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778771
Identifier: 78778771
GI number: 78778771
Start: 367596
End: 368081
Strand: Direct
Name: 78778771
Synonym: PMT9312_0386
Alternate gene names: NA
Gene position: 367596-368081 (Clockwise)
Preceding gene: 78778770
Following gene: 78778772
Centisome position: 21.51
GC content: 33.74
Gene sequence:
>486_bases ATGAATAAAAAGGAAGAATTCCCAGAAAATCAATTTAAATGGCCAATATGTAAGGAACTATTATTGCTCGTTCTTGAAGA TAAGGTTAGTGATGTTTTTGTTTGCGAATTGGTTTGGGAAAGACTTTTTTACACTACAGAACCACCTAAAAATGATTGGG CTCCTAGTGCATTAACTCCTACTTATTGGTCAGATAAATTTGTAAAAGCTCCTCAAATCATTTCAGAGCGAATAGCATCA GTACATTTGACTCGATCAATTCCAAAGGAACATAAGCAGGGATTGAAAAAATTTCTTAATTTTAAAGGTTATAAGATTAA CGAACTTTATCCAAGAAGAACTAGAAGAGCGACCGCAGTAAATTGGTTGATTTATTGGGCAATTGAAAATAATTGTTTTT CAAGTGATAATGATGTTATTCCAAGTCCGAGTACTCCGCCTGTTAATCCAGCAAAAGGACATTTTGGCGATCCAGAAATC AAATAA
Upstream 100 bases:
>100_bases CTTTAAATGTTGGTATGCCCTATCAAATTATTCAATATGCATCACAATATAAAGAGGATGTTATGCCTTATTTTTCTTTG ATTTTGATAAGGTCCGATTA
Downstream 100 bases:
>100_bases ATCTTTTTTAATAAGGTAAACGATTCTATTAAAGGTATAGTTGTAATGGATACTAATTTCTTTGGAGAGAAGAATTGATT CTCCCTACAATAGCAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNKKEEFPENQFKWPICKELLLLVLEDKVSDVFVCELVWERLFYTTEPPKNDWAPSALTPTYWSDKFVKAPQIISERIAS VHLTRSIPKEHKQGLKKFLNFKGYKINELYPRRTRRATAVNWLIYWAIENNCFSSDNDVIPSPSTPPVNPAKGHFGDPEI K
Sequences:
>Translated_161_residues MNKKEEFPENQFKWPICKELLLLVLEDKVSDVFVCELVWERLFYTTEPPKNDWAPSALTPTYWSDKFVKAPQIISERIAS VHLTRSIPKEHKQGLKKFLNFKGYKINELYPRRTRRATAVNWLIYWAIENNCFSSDNDVIPSPSTPPVNPAKGHFGDPEI K >Mature_161_residues MNKKEEFPENQFKWPICKELLLLVLEDKVSDVFVCELVWERLFYTTEPPKNDWAPSALTPTYWSDKFVKAPQIISERIAS VHLTRSIPKEHKQGLKKFLNFKGYKINELYPRRTRRATAVNWLIYWAIENNCFSSDNDVIPSPSTPPVNPAKGHFGDPEI K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18809; Mature: 18809
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKEEFPENQFKWPICKELLLLVLEDKVSDVFVCELVWERLFYTTEPPKNDWAPSALTP CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TYWSDKFVKAPQIISERIASVHLTRSIPKEHKQGLKKFLNFKGYKINELYPRRTRRATAV CCCCCCHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEE NWLIYWAIENNCFSSDNDVIPSPSTPPVNPAKGHFGDPEIK EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKKEEFPENQFKWPICKELLLLVLEDKVSDVFVCELVWERLFYTTEPPKNDWAPSALTP CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TYWSDKFVKAPQIISERIASVHLTRSIPKEHKQGLKKFLNFKGYKINELYPRRTRRATAV CCCCCCHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEE NWLIYWAIENNCFSSDNDVIPSPSTPPVNPAKGHFGDPEIK EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA