| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778758
Identifier: 78778758
GI number: 78778758
Start: 350974
End: 353700
Strand: Direct
Name: 78778758
Synonym: PMT9312_0373
Alternate gene names: NA
Gene position: 350974-353700 (Clockwise)
Preceding gene: 78778757
Following gene: 78778759
Centisome position: 20.53
GC content: 29.23
Gene sequence:
>2727_bases TTGATTGATCAAGAACTCATTGATTTTTTTAAAAACCAAATAGAAAGTAAAAGCTTTCGTTCTGGGGTTTCAGTAGAAGA TTCTTATGAAGAAATTAAAAGTGATCATATAAAGTTTTATGGTAATCAAGAAGATAAATTAAAAGCTATTGATCTAGCCT TTATTGAACTTAAAAGGCAAAGATCAGGGATAAGATCTCTTAAATTTGCAAGTACTATTTCTAAAAAGAATCAACAAGAA TGGTACTTATCGCCTGATGAAAATATAGATTTAAATTGGTTTGCTTTTAAAAAATATTTATCAGTTTCAAAATCTTGGAG CGATGAAGAGATTAATTCAGTAGATGAATCATCTACAAAAGTTGTAAATCAAATACTGTCTCCAGCATCAGAAAAAGAAA AAAGATTCCAAGGTTTAGTTCTGGGATATGTGCAAAGTGGAAAGACATCAAACATGGCCGCTACAATAGCTAAAGCAGCA GATAGAGGCTATAAGTTAATAATAATTCTTGCAGGATTAACTGATTCTTTAAGGAAGCAAACTCAAATTAGGATGCAAAA AGATTTGGGTCAGCATCTTCAAGATAGATGGTATTTTTGTACAGATGAAGAAAATGATTTCACTTCATACACTGAATTAC CTACTTGGGATAACGAAAGAAAAACAACAATTCTTATAATTAAAAAAAATGTATTTATTTTAAAGAGGCTCCTAAAGAAA ATTAAGAATCAGTCCGAAGTAAAAAGGAAAGGAATGACAACTTTGATAGTTGATGATGAGTGCGATCAAGCCAGTCTAAA TACAAAAGCATATAGAGAACAAGTATCTCAAACTAATAAATATATAAGACAAATTTTAGAGAATTTAAGAAAAGTAACTT ATCTAGGTTATACGGCTACTCCTTATGCGAATATTTTAACCCCTCAAAAATCTGTTGATGGTAAATTAGATCTTTATCCA AATGATTTTATAGTTTCACTAGATGAACCCAAAAACTATTTTGGCGCCAGAAAATTATTTGGAGATGAATTTGATGTAGA TAATGATAATGAACTTCCTTTTATAAGAAGAGTCAAGGCTGATGAAATAGAAAATCTCCAACCACCTTCACAAAAAGCGA GATTTGATTTCACTCCATCATTAACTCAAAGTTTGGTTGATTCTTGTGATTATTATTTGCTTTGCTTGTGTGCGAAAACT CTAAGAGGTCAAGGGAAAGATCATTGCTGTATGCTGATTCACACCACAATATATTCTGAAACACATAAAGATCTTAAGAA TCTTTTGTTGAAGGAATGGTTAAATCCCTTAATTAAGAATATTGAAAATGGAGATGAATTTACTTTAAATAGACTTAAAT TTTTGTGGGAAAAAGAATCAAAAGTATTGGATACAAATTTTAGAAATAAATTGAGTTGTCCTGAATGCATAGAATCTTTT AATGAAATTAAAGATTTAATTTTAAAAGAAGCAAAAAGTATTGAACTTGTAATTGAAAATTCAACCGTTAATTCAAAAGA TAGATTAGATTTTGATACTGATAAGAATATTCATGCGATTGTTATAGGTGGAAATGTTCTCGCTAGAGGTTTAACAATAG AAGGTTTAATTTGTAGTTTTTTTATTAGGTCTTCAACTCAATACGATACTTTAATGCAAATGGGTAGATGGTTTGGATAT AGAAAAGGATATGAAGATCTTCCTAGAATCTGGATGACTTTTGATCTGGAATATAACTTTAGAGACCTAGTTAATGTTGA GAATTTAATAAGGTCTGATATTTCTGATATGGGAAAAGAGGGACTTACTCCACAAGAAATGTCAATCAGAGTTCCTCTTC TTGCCAATTTAAATATAACCGCAAGAAATAAATTGAATATGAATAAATTATCTGTTTGTGTTGGAAGCTTATATGGAACT TACAAACAAACAATTGCATTTCCGACGGATAAAAACTTTCACAAATCAAATTTCTCTTGTATTGAGAATTTAATAAATAA CTCAACAAAATATACTAAAGATAATTTTCAAAAAACAGATAATTCATATGTTTTAAAAGATGTAGAATATCCGCCTATTT TAAAGTTCTTTAGATCATTCAAATTTAATGAGGAAACATTACAAAAAATTGATCAGTTTATTGAAAATGAAGTAGATGAA GATAGTTCATCTTTAGGAAAATGGAATATAGGAATAATTGGGTCGAAAACATCGAATAGAGAAATAAAAATTGGAAAATT AGATGACGTTGGTACAGTAAATAGATCCAAACAATTTATTGATACAGCATCTTTAAAAAATAAGATTTCTATAAAAGCAT TGATGTTTGCTAGTGATTTATTGGTTGATGTAGATAGGCAAGAATATAATAAATGGAAACAGGAAAAAGATGATTCAATA AGAGAGTGGGATCTTGTAAGACAATTTAGGGAGGAAGTTTTAGGGAAAAGACCCTTACTTTTGATATTCCCAATTAATAG AGACTCGCTTCCACGCAATTGGAAGAATATCGATTTGGAAAAAATAGATGATGCACAAAAGAGAGTTCCACTTTTTTATG GATTAGAAAAAGATGATATGGAGAAACATGAAATATTTGGGGTGGGAGTTGTTTTCCCATCTGTTGATAAATTTAATGCT GAAAAATTCTTAAAACTTGATTTGATAAATATCGATGAGTTTGGAGAAATAATTGATGATAAAGAATTAGTTTCTCAAGA TATCTAA
Upstream 100 bases:
>100_bases AAAAATACAGTATTTAAAAGATACTTTTTTGAATATTAAAAATTAATTAAAAAAGTTTTTTCAAATTAGCATATAATAAT TTAAAAATTTCTTCGCAAAA
Downstream 100 bases:
>100_bases ATGCATAAGAAAGAATTATGCGTAAAATTATACTCAAGAAATATTTGATAAATAATGATTGAAAGATTAGAAAAAATTTG GCAAGAAGTTAACTCTATAA
Product: endonuclease
Products: NA
Alternate protein names: Endonuclease Z1 Domain Protein; Endonuclease Z1 Domain; Endonuclease Z1 Domain-Containing Protein; Helicase; Conserved Hypothethical Protein; Z1 Domain-Containing Protein; Stress-Sensitive Restriction System Protein; Stress-Sensitive Restriction System
Number of amino acids: Translated: 908; Mature: 908
Protein sequence:
>908_residues MIDQELIDFFKNQIESKSFRSGVSVEDSYEEIKSDHIKFYGNQEDKLKAIDLAFIELKRQRSGIRSLKFASTISKKNQQE WYLSPDENIDLNWFAFKKYLSVSKSWSDEEINSVDESSTKVVNQILSPASEKEKRFQGLVLGYVQSGKTSNMAATIAKAA DRGYKLIIILAGLTDSLRKQTQIRMQKDLGQHLQDRWYFCTDEENDFTSYTELPTWDNERKTTILIIKKNVFILKRLLKK IKNQSEVKRKGMTTLIVDDECDQASLNTKAYREQVSQTNKYIRQILENLRKVTYLGYTATPYANILTPQKSVDGKLDLYP NDFIVSLDEPKNYFGARKLFGDEFDVDNDNELPFIRRVKADEIENLQPPSQKARFDFTPSLTQSLVDSCDYYLLCLCAKT LRGQGKDHCCMLIHTTIYSETHKDLKNLLLKEWLNPLIKNIENGDEFTLNRLKFLWEKESKVLDTNFRNKLSCPECIESF NEIKDLILKEAKSIELVIENSTVNSKDRLDFDTDKNIHAIVIGGNVLARGLTIEGLICSFFIRSSTQYDTLMQMGRWFGY RKGYEDLPRIWMTFDLEYNFRDLVNVENLIRSDISDMGKEGLTPQEMSIRVPLLANLNITARNKLNMNKLSVCVGSLYGT YKQTIAFPTDKNFHKSNFSCIENLINNSTKYTKDNFQKTDNSYVLKDVEYPPILKFFRSFKFNEETLQKIDQFIENEVDE DSSSLGKWNIGIIGSKTSNREIKIGKLDDVGTVNRSKQFIDTASLKNKISIKALMFASDLLVDVDRQEYNKWKQEKDDSI REWDLVRQFREEVLGKRPLLLIFPINRDSLPRNWKNIDLEKIDDAQKRVPLFYGLEKDDMEKHEIFGVGVVFPSVDKFNA EKFLKLDLINIDEFGEIIDDKELVSQDI
Sequences:
>Translated_908_residues MIDQELIDFFKNQIESKSFRSGVSVEDSYEEIKSDHIKFYGNQEDKLKAIDLAFIELKRQRSGIRSLKFASTISKKNQQE WYLSPDENIDLNWFAFKKYLSVSKSWSDEEINSVDESSTKVVNQILSPASEKEKRFQGLVLGYVQSGKTSNMAATIAKAA DRGYKLIIILAGLTDSLRKQTQIRMQKDLGQHLQDRWYFCTDEENDFTSYTELPTWDNERKTTILIIKKNVFILKRLLKK IKNQSEVKRKGMTTLIVDDECDQASLNTKAYREQVSQTNKYIRQILENLRKVTYLGYTATPYANILTPQKSVDGKLDLYP NDFIVSLDEPKNYFGARKLFGDEFDVDNDNELPFIRRVKADEIENLQPPSQKARFDFTPSLTQSLVDSCDYYLLCLCAKT LRGQGKDHCCMLIHTTIYSETHKDLKNLLLKEWLNPLIKNIENGDEFTLNRLKFLWEKESKVLDTNFRNKLSCPECIESF NEIKDLILKEAKSIELVIENSTVNSKDRLDFDTDKNIHAIVIGGNVLARGLTIEGLICSFFIRSSTQYDTLMQMGRWFGY RKGYEDLPRIWMTFDLEYNFRDLVNVENLIRSDISDMGKEGLTPQEMSIRVPLLANLNITARNKLNMNKLSVCVGSLYGT YKQTIAFPTDKNFHKSNFSCIENLINNSTKYTKDNFQKTDNSYVLKDVEYPPILKFFRSFKFNEETLQKIDQFIENEVDE DSSSLGKWNIGIIGSKTSNREIKIGKLDDVGTVNRSKQFIDTASLKNKISIKALMFASDLLVDVDRQEYNKWKQEKDDSI REWDLVRQFREEVLGKRPLLLIFPINRDSLPRNWKNIDLEKIDDAQKRVPLFYGLEKDDMEKHEIFGVGVVFPSVDKFNA EKFLKLDLINIDEFGEIIDDKELVSQDI >Mature_908_residues MIDQELIDFFKNQIESKSFRSGVSVEDSYEEIKSDHIKFYGNQEDKLKAIDLAFIELKRQRSGIRSLKFASTISKKNQQE WYLSPDENIDLNWFAFKKYLSVSKSWSDEEINSVDESSTKVVNQILSPASEKEKRFQGLVLGYVQSGKTSNMAATIAKAA DRGYKLIIILAGLTDSLRKQTQIRMQKDLGQHLQDRWYFCTDEENDFTSYTELPTWDNERKTTILIIKKNVFILKRLLKK IKNQSEVKRKGMTTLIVDDECDQASLNTKAYREQVSQTNKYIRQILENLRKVTYLGYTATPYANILTPQKSVDGKLDLYP NDFIVSLDEPKNYFGARKLFGDEFDVDNDNELPFIRRVKADEIENLQPPSQKARFDFTPSLTQSLVDSCDYYLLCLCAKT LRGQGKDHCCMLIHTTIYSETHKDLKNLLLKEWLNPLIKNIENGDEFTLNRLKFLWEKESKVLDTNFRNKLSCPECIESF NEIKDLILKEAKSIELVIENSTVNSKDRLDFDTDKNIHAIVIGGNVLARGLTIEGLICSFFIRSSTQYDTLMQMGRWFGY RKGYEDLPRIWMTFDLEYNFRDLVNVENLIRSDISDMGKEGLTPQEMSIRVPLLANLNITARNKLNMNKLSVCVGSLYGT YKQTIAFPTDKNFHKSNFSCIENLINNSTKYTKDNFQKTDNSYVLKDVEYPPILKFFRSFKFNEETLQKIDQFIENEVDE DSSSLGKWNIGIIGSKTSNREIKIGKLDDVGTVNRSKQFIDTASLKNKISIKALMFASDLLVDVDRQEYNKWKQEKDDSI REWDLVRQFREEVLGKRPLLLIFPINRDSLPRNWKNIDLEKIDDAQKRVPLFYGLEKDDMEKHEIFGVGVVFPSVDKFNA EKFLKLDLINIDEFGEIIDDKELVSQDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105443; Mature: 105443
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDQELIDFFKNQIESKSFRSGVSVEDSYEEIKSDHIKFYGNQEDKLKAIDLAFIELKRQ CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH RSGIRSLKFASTISKKNQQEWYLSPDENIDLNWFAFKKYLSVSKSWSDEEINSVDESSTK HCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHH VVNQILSPASEKEKRFQGLVLGYVQSGKTSNMAATIAKAADRGYKLIIILAGLTDSLRKQ HHHHHHCCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHH TQIRMQKDLGQHLQDRWYFCTDEENDFTSYTELPTWDNERKTTILIIKKNVFILKRLLKK HHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHH IKNQSEVKRKGMTTLIVDDECDQASLNTKAYREQVSQTNKYIRQILENLRKVTYLGYTAT HHCHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC PYANILTPQKSVDGKLDLYPNDFIVSLDEPKNYFGARKLFGDEFDVDNDNELPFIRRVKA CCHHHCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCH DEIENLQPPSQKARFDFTPSLTQSLVDSCDYYLLCLCAKTLRGQGKDHCCMLIHTTIYSE HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH THKDLKNLLLKEWLNPLIKNIENGDEFTLNRLKFLWEKESKVLDTNFRNKLSCPECIESF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH NEIKDLILKEAKSIELVIENSTVNSKDRLDFDTDKNIHAIVIGGNVLARGLTIEGLICSF HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH FIRSSTQYDTLMQMGRWFGYRKGYEDLPRIWMTFDLEYNFRDLVNVENLIRSDISDMGKE HHHCCCCHHHHHHHHHHHHHCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHC GLTPQEMSIRVPLLANLNITARNKLNMNKLSVCVGSLYGTYKQTIAFPTDKNFHKSNFSC CCCCCCCEEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHH IENLINNSTKYTKDNFQKTDNSYVLKDVEYPPILKFFRSFKFNEETLQKIDQFIENEVDE HHHHHCCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC DSSSLGKWNIGIIGSKTSNREIKIGKLDDVGTVNRSKQFIDTASLKNKISIKALMFASDL CCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH LVDVDRQEYNKWKQEKDDSIREWDLVRQFREEVLGKRPLLLIFPINRDSLPRNWKNIDLE HEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHH KIDDAQKRVPLFYGLEKDDMEKHEIFGVGVVFPSVDKFNAEKFLKLDLINIDEFGEIIDD HHCCHHHCCCEEECCCCCCCCHHHEEEEEEECCCCCCCCCCCEEEEEEECHHHHHHHHCC KELVSQDI HHHHHCCC >Mature Secondary Structure MIDQELIDFFKNQIESKSFRSGVSVEDSYEEIKSDHIKFYGNQEDKLKAIDLAFIELKRQ CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH RSGIRSLKFASTISKKNQQEWYLSPDENIDLNWFAFKKYLSVSKSWSDEEINSVDESSTK HCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHH VVNQILSPASEKEKRFQGLVLGYVQSGKTSNMAATIAKAADRGYKLIIILAGLTDSLRKQ HHHHHHCCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHH TQIRMQKDLGQHLQDRWYFCTDEENDFTSYTELPTWDNERKTTILIIKKNVFILKRLLKK HHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHH IKNQSEVKRKGMTTLIVDDECDQASLNTKAYREQVSQTNKYIRQILENLRKVTYLGYTAT HHCHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC PYANILTPQKSVDGKLDLYPNDFIVSLDEPKNYFGARKLFGDEFDVDNDNELPFIRRVKA CCHHHCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCH DEIENLQPPSQKARFDFTPSLTQSLVDSCDYYLLCLCAKTLRGQGKDHCCMLIHTTIYSE HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH THKDLKNLLLKEWLNPLIKNIENGDEFTLNRLKFLWEKESKVLDTNFRNKLSCPECIESF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH NEIKDLILKEAKSIELVIENSTVNSKDRLDFDTDKNIHAIVIGGNVLARGLTIEGLICSF HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH FIRSSTQYDTLMQMGRWFGYRKGYEDLPRIWMTFDLEYNFRDLVNVENLIRSDISDMGKE HHHCCCCHHHHHHHHHHHHHCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHC GLTPQEMSIRVPLLANLNITARNKLNMNKLSVCVGSLYGTYKQTIAFPTDKNFHKSNFSC CCCCCCCEEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHH IENLINNSTKYTKDNFQKTDNSYVLKDVEYPPILKFFRSFKFNEETLQKIDQFIENEVDE HHHHHCCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC DSSSLGKWNIGIIGSKTSNREIKIGKLDDVGTVNRSKQFIDTASLKNKISIKALMFASDL CCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH LVDVDRQEYNKWKQEKDDSIREWDLVRQFREEVLGKRPLLLIFPINRDSLPRNWKNIDLE HEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHH KIDDAQKRVPLFYGLEKDDMEKHEIFGVGVVFPSVDKFNAEKFLKLDLINIDEFGEIIDD HHCCHHHCCCEEECCCCCCCCHHHEEEEEEECCCCCCCCCCCEEEEEEECHHHHHHHHCC KELVSQDI HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA