| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778729
Identifier: 78778729
GI number: 78778729
Start: 330845
End: 331132
Strand: Direct
Name: 78778729
Synonym: PMT9312_0344
Alternate gene names: NA
Gene position: 330845-331132 (Clockwise)
Preceding gene: 78778725
Following gene: 78778731
Centisome position: 19.36
GC content: 37.15
Gene sequence:
>288_bases TTGGCTGTAGATCGAGAACTTTTAAAAGAAGTTACCCAAGAACTTTGGAATACTGTAAAAAAATTAAGACCTGAAGTTGA TCGGCAAACCAGGCTTCAATTGGTTTTAAAAGCCTTATTGACTATTGGAGATTTGCCAGATCAAATGCAGGCTGCAATGG TAGTGGGTGTTTGTGCAGAAATGGACAAGGGTGATACTGAAAATGTTGAAACTAATTCTCAAAAAGATTCAAGTGGAGTT GACACTTCCACAGGAAGAAAAGTAGTTAGGAGAAGTTCAGCTAAATAA
Upstream 100 bases:
>100_bases TGTTCGCGTAGAAAAATTTCAACTAACAATCTTTTATTGAATATTATTTTACGAGATCCAATTTTTTGTTAGATTAGTAG AAAGACAAGAAGGTTTTAAT
Downstream 100 bases:
>100_bases ACTTTAAAGATTAACCTTTAATATTTCTTGATTCGTTTTTATTAAGACGAGTAAATAGATAATATGAAATTACAAGTAAA AGAGGAACAAATATTGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MAVDRELLKEVTQELWNTVKKLRPEVDRQTRLQLVLKALLTIGDLPDQMQAAMVVGVCAEMDKGDTENVETNSQKDSSGV DTSTGRKVVRRSSAK
Sequences:
>Translated_95_residues MAVDRELLKEVTQELWNTVKKLRPEVDRQTRLQLVLKALLTIGDLPDQMQAAMVVGVCAEMDKGDTENVETNSQKDSSGV DTSTGRKVVRRSSAK >Mature_94_residues AVDRELLKEVTQELWNTVKKLRPEVDRQTRLQLVLKALLTIGDLPDQMQAAMVVGVCAEMDKGDTENVETNSQKDSSGVD TSTGRKVVRRSSAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10558; Mature: 10427
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDRELLKEVTQELWNTVKKLRPEVDRQTRLQLVLKALLTIGDLPDQMQAAMVVGVCAE CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MDKGDTENVETNSQKDSSGVDTSTGRKVVRRSSAK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure AVDRELLKEVTQELWNTVKKLRPEVDRQTRLQLVLKALLTIGDLPDQMQAAMVVGVCAE CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MDKGDTENVETNSQKDSSGVDTSTGRKVVRRSSAK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA