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The map label for this gene is 78778721

Identifier: 78778721

GI number: 78778721

Start: 323860

End: 324630

Strand: Reverse

Name: 78778721

Synonym: PMT9312_0336

Alternate gene names: NA

Gene position: 324630-323860 (Counterclockwise)

Preceding gene: 78778722

Following gene: 78778720

Centisome position: 18.99

GC content: 23.74

Gene sequence:

>771_bases
ATGATCAAGCTAATGAAATCAGTATTTTTAATAATTGCAATCCTAATAAATCTTTTTAGTCATTCATTCATAAAATCTGA
AGAAAAGATTGATTCAGCAACTAATAAAATTGAGAATGTTGCTAAAAAAAATTTAATTCCTGAAGATAAAACTGAAATAA
GAAAAATTCATATCGTCAAAATTGGAGATACAATTACAAGTATTTCAAAAAACTATTCAATCAATAAAGATTTAATCATT
AAATTGAATAATTTAAAAGATGATAATTATATCTTTATTGGCCAAAATCTTATTATCTCTGAATCTACTAAAAATTCTAC
ACAACAATCAGATTTAATAAATAATTATCATATTGTTCAAATAGGAGAAAATCTTACTGAGATATCCAACAAATATAAAT
TAAATTTAGGATATTTGATAGAAATTAATAATCTCAAGAATCCAGACTCTATAAAAGTTGGGCAAAAGCTCTTCTTGAGA
AAAAACAAGCCAATTAGTTTAGAAAATGATCAAATAATTAAAAATAAACAAAATGAATTACTTGAGTTAGATAAACAAAT
TTATGGTCCAATAATTATTCAAAGTAAATCTTATGAAGAATTTAAAGGTAGAAAAGTTTTCAATGTACTAAATCAAGATA
ATAAAAAACTGATTCTTTCAATAAATTGCGATACAAATGAATTAGATGTAAGAATCCCAGGCAGAAAATGGAGGGGAGGG
GAGCCTGCTAAAGAAGAATTCGAAAAAAATTTAATAAATGATTTTTGTTAG

Upstream 100 bases:

>100_bases
AGAATCAAGAAATTTTTAAAGTTTATTTTTAAGATTTAAATTACTAAAATTATTTTTCAGAAACCTAGCGATTTCAAATA
AAGAGATTATCTTTAAATAA

Downstream 100 bases:

>100_bases
AACTTTTAATTAATATGTGTGAATAATTTGTCAAAGAATATTAATGATGGGTTATTCTTTAAAAAGCTAAATTAAGATTA
ATGGCAATTTCAAGAGGAGA

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Repeat-Containing Protein; Soluble Lytic Murein Transglycosylase

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MIKLMKSVFLIIAILINLFSHSFIKSEEKIDSATNKIENVAKKNLIPEDKTEIRKIHIVKIGDTITSISKNYSINKDLII
KLNNLKDDNYIFIGQNLIISESTKNSTQQSDLINNYHIVQIGENLTEISNKYKLNLGYLIEINNLKNPDSIKVGQKLFLR
KNKPISLENDQIIKNKQNELLELDKQIYGPIIIQSKSYEEFKGRKVFNVLNQDNKKLILSINCDTNELDVRIPGRKWRGG
EPAKEEFEKNLINDFC

Sequences:

>Translated_256_residues
MIKLMKSVFLIIAILINLFSHSFIKSEEKIDSATNKIENVAKKNLIPEDKTEIRKIHIVKIGDTITSISKNYSINKDLII
KLNNLKDDNYIFIGQNLIISESTKNSTQQSDLINNYHIVQIGENLTEISNKYKLNLGYLIEINNLKNPDSIKVGQKLFLR
KNKPISLENDQIIKNKQNELLELDKQIYGPIIIQSKSYEEFKGRKVFNVLNQDNKKLILSINCDTNELDVRIPGRKWRGG
EPAKEEFEKNLINDFC
>Mature_256_residues
MIKLMKSVFLIIAILINLFSHSFIKSEEKIDSATNKIENVAKKNLIPEDKTEIRKIHIVKIGDTITSISKNYSINKDLII
KLNNLKDDNYIFIGQNLIISESTKNSTQQSDLINNYHIVQIGENLTEISNKYKLNLGYLIEINNLKNPDSIKVGQKLFLR
KNKPISLENDQIIKNKQNELLELDKQIYGPIIIQSKSYEEFKGRKVFNVLNQDNKKLILSINCDTNELDVRIPGRKWRGG
EPAKEEFEKNLINDFC

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29563; Mature: 29563

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLMKSVFLIIAILINLFSHSFIKSEEKIDSATNKIENVAKKNLIPEDKTEIRKIHIVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
IGDTITSISKNYSINKDLIIKLNNLKDDNYIFIGQNLIISESTKNSTQQSDLINNYHIVQ
ECCHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECEEEEECCCCCCCHHHHHHCCEEEEE
IGENLTEISNKYKLNLGYLIEINNLKNPDSIKVGQKLFLRKNKPISLENDQIIKNKQNEL
ECCHHHHHCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHH
LELDKQIYGPIIIQSKSYEEFKGRKVFNVLNQDNKKLILSINCDTNELDVRIPGRKWRGG
HHHHHHHCCCEEEECCCHHHHCCCHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCC
EPAKEEFEKNLINDFC
CCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKLMKSVFLIIAILINLFSHSFIKSEEKIDSATNKIENVAKKNLIPEDKTEIRKIHIVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
IGDTITSISKNYSINKDLIIKLNNLKDDNYIFIGQNLIISESTKNSTQQSDLINNYHIVQ
ECCHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECEEEEECCCCCCCHHHHHHCCEEEEE
IGENLTEISNKYKLNLGYLIEINNLKNPDSIKVGQKLFLRKNKPISLENDQIIKNKQNEL
ECCHHHHHCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHH
LELDKQIYGPIIIQSKSYEEFKGRKVFNVLNQDNKKLILSINCDTNELDVRIPGRKWRGG
HHHHHHHCCCEEEECCCHHHHCCCHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCC
EPAKEEFEKNLINDFC
CCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA