| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is rpmG
Identifier: 161350035
GI number: 161350035
Start: 868017
End: 868211
Strand: Direct
Name: rpmG
Synonym: PMT9312_0931
Alternate gene names: 161350035
Gene position: 868017-868211 (Clockwise)
Preceding gene: 78779312
Following gene: 78779316
Centisome position: 50.78
GC content: 32.82
Gene sequence:
>195_bases ATGGCTAAAAAAGGGACAAGAGTTGTAGTGACCCTGGAATGTACTGAAGCTAGGACAAGCACAGATCCTAAGAGATCAAA TGGTGTCTCAAGATATACTACTGAAAAGAATCGTAGAAATACAACTGAAAGATTAGAACTAAAAAAGTTTAATCCTCATT TAAATAGAATGACAATACACAAAGAAATAAAGTAA
Upstream 100 bases:
>100_bases ATATATTTTTAATCAATGATGATAAAAGAAATGATTATATCTTCAAAATAGTTTGTTGAAGATGTACAATAGAAAATTAT ACAATAAAGTATTAATTAAA
Downstream 100 bases:
>100_bases TCGAATCAAATCATGCCTAATTCAATTTTTAAAAAACAATTATCACCTATCAAACCCGGAGATCCTATTGACTATAAGGA TGTAGAACTACTAAAAAAAT
Product: 50S ribosomal protein L33
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MAKKGTRVVVTLECTEARTSTDPKRSNGVSRYTTEKNRRNTTERLELKKFNPHLNRMTIHKEIK
Sequences:
>Translated_64_residues MAKKGTRVVVTLECTEARTSTDPKRSNGVSRYTTEKNRRNTTERLELKKFNPHLNRMTIHKEIK >Mature_63_residues AKKGTRVVVTLECTEARTSTDPKRSNGVSRYTTEKNRRNTTERLELKKFNPHLNRMTIHKEIK
Specific function: Unknown
COG id: COG0267
COG function: function code J; Ribosomal protein L33
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L33P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001705 - InterPro: IPR011332 [H]
Pfam domain/function: PF00471 Ribosomal_L33 [H]
EC number: NA
Molecular weight: Translated: 7502; Mature: 7371
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKGTRVVVTLECTEARTSTDPKRSNGVSRYTTEKNRRNTTERLELKKFNPHLNRMTIH CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE KEIK EECC >Mature Secondary Structure AKKGTRVVVTLECTEARTSTDPKRSNGVSRYTTEKNRRNTTERLELKKFNPHLNRMTIH CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE KEIK EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA