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The map label for this gene is 78484794

Identifier: 78484794

GI number: 78484794

Start: 502351

End: 503727

Strand: Reverse

Name: 78484794

Synonym: Tcr_0449

Alternate gene names: NA

Gene position: 503727-502351 (Counterclockwise)

Preceding gene: 78484795

Following gene: 78484793

Centisome position: 20.75

GC content: 42.7

Gene sequence:

>1377_bases
ATGAAAAAAACAAGAATCGCTTTAGCAATTGCAACTGCTGCAATGGTTTCAACGCCTGTTCTAGCAACGAACGGTACAAA
CATGATTGGTTTAGGCGCACAATCAAATGCAATGGGTGGTACAGGGGTAGCGGCTAGCTACGGTGCAGAAACAGTTATTG
CTAACCCAGCCATGATCGGTAAAACCACAGGAACTGAAATGACTTTCGGCGGCACTTTGTTCCAACCATCCGTTGAAACA
ACAAACAATATCAAAAACAGCGCTGTTGCTGCAGCTAATGGCATTACGTCTGCACAGGCTGCTGCTGCCGGAGCACCGAT
TGGAAGTGCAACCAGTGATGCAGATACCAATGTTATTCCAGCAGTTTCTTTATCAAGCCGAATTAATGACAAATTAACTT
TCGGTATTGGTATGTTTGGTACATCAGGTATGGGGGTTGATTACCAAGATGAAGACATGTTGTTTAATGCACAAACAAAT
ATGCAAATCATGAAGTTCGCTCCAACATTAGCGTTTAACTCATCAAAATTTGGGATTGGTGTTTCGCCAATTTTACAGTA
TGGCTCATTAGACATTAACTACCAAACTCAAATGACAAATAATTCTGGTGCACCAATGTATGTTCAAGGCGGTGGAAACA
TCAACTCAACTCCATCGGCAACCCCTGCCATGAAAACCGTAGGTCACGGCATGGCTTCTGACCTTGGAATGGGATATAAC
ATTGGTGGTTACTTTAATATCACTAATGACTTAACCGTAGCAGCGTCTTACTTGTCGCCTATCAACATGAAATATAAAGG
TCAACTATCTACTGCATCAGGTGCGTTTGTTAACCCAGCCTCTGACTTTACAACACCGTTCAGCGACAATCTTGAACAGC
CTTCTGAAATCAAGGTCGGTGCGGAATACATCATGGGAAGATTCTCTGTCAACGCCGATTATAAAAAAGTGGCTTGGGGA
TCTGCTAAAGGATATAAAGACTTTGGCTGGGAGGACCAGGACGTTTACTCTTTAGGTGCTAAATTTGCTACAAACAACTA
TTGGTTAGGGGCAGGTTATAACTACGGAAGCAACCCAATTAAAGAACAAGATGGAACAAGCTATAAAGGCGCTGTTATCA
ACATGTTTAACAACACGTTCTTCCCTGCAATCACAGAAAGTCACTTTACCTTTGGTGGTGGCTACTCTATTACCAAGCAT
ACGACCTTAGAAGGGTCTGTTGTATATGCGCCAGAAGTTGAAAACTCTGTTGACACGACAGCTGTCTCTTCAGCATTTGC
ATCAGGAATGGCAGGCACACCAACGGCAGCTGCTAGTACCAGTACGACAAAGCATTCACAGATTGGCTATACAGTGCAGG
TAAAATATAATTTTTAA

Upstream 100 bases:

>100_bases
CATAGTAGCGTCTGACGAAAAACAGCATGCAGGCATCAGCAAAGACTAAGAGCCCCATCATGCTTTATTGTATTCATTAG
ATAAAAAAGAGAGACACTCG

Downstream 100 bases:

>100_bases
TATAAAAATTAAACGTTAACTTGTAAAAAGCCCCTTTCTAGGGGCTTTTTTTTGTCCCAAAAATAACTTTTTAACTTCTT
AATCATTTGTCATATTCCCT

Product: aromatic hydrocarbon degradation protein

Products: NA

Alternate protein names: Aromatic Hydrocarbon Degradation Membrane Protein; Transporter Protein; Long-Chain Fatty Acid ABC Transporter

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MKKTRIALAIATAAMVSTPVLATNGTNMIGLGAQSNAMGGTGVAASYGAETVIANPAMIGKTTGTEMTFGGTLFQPSVET
TNNIKNSAVAAANGITSAQAAAAGAPIGSATSDADTNVIPAVSLSSRINDKLTFGIGMFGTSGMGVDYQDEDMLFNAQTN
MQIMKFAPTLAFNSSKFGIGVSPILQYGSLDINYQTQMTNNSGAPMYVQGGGNINSTPSATPAMKTVGHGMASDLGMGYN
IGGYFNITNDLTVAASYLSPINMKYKGQLSTASGAFVNPASDFTTPFSDNLEQPSEIKVGAEYIMGRFSVNADYKKVAWG
SAKGYKDFGWEDQDVYSLGAKFATNNYWLGAGYNYGSNPIKEQDGTSYKGAVINMFNNTFFPAITESHFTFGGGYSITKH
TTLEGSVVYAPEVENSVDTTAVSSAFASGMAGTPTAAASTSTTKHSQIGYTVQVKYNF

Sequences:

>Translated_458_residues
MKKTRIALAIATAAMVSTPVLATNGTNMIGLGAQSNAMGGTGVAASYGAETVIANPAMIGKTTGTEMTFGGTLFQPSVET
TNNIKNSAVAAANGITSAQAAAAGAPIGSATSDADTNVIPAVSLSSRINDKLTFGIGMFGTSGMGVDYQDEDMLFNAQTN
MQIMKFAPTLAFNSSKFGIGVSPILQYGSLDINYQTQMTNNSGAPMYVQGGGNINSTPSATPAMKTVGHGMASDLGMGYN
IGGYFNITNDLTVAASYLSPINMKYKGQLSTASGAFVNPASDFTTPFSDNLEQPSEIKVGAEYIMGRFSVNADYKKVAWG
SAKGYKDFGWEDQDVYSLGAKFATNNYWLGAGYNYGSNPIKEQDGTSYKGAVINMFNNTFFPAITESHFTFGGGYSITKH
TTLEGSVVYAPEVENSVDTTAVSSAFASGMAGTPTAAASTSTTKHSQIGYTVQVKYNF
>Mature_458_residues
MKKTRIALAIATAAMVSTPVLATNGTNMIGLGAQSNAMGGTGVAASYGAETVIANPAMIGKTTGTEMTFGGTLFQPSVET
TNNIKNSAVAAANGITSAQAAAAGAPIGSATSDADTNVIPAVSLSSRINDKLTFGIGMFGTSGMGVDYQDEDMLFNAQTN
MQIMKFAPTLAFNSSKFGIGVSPILQYGSLDINYQTQMTNNSGAPMYVQGGGNINSTPSATPAMKTVGHGMASDLGMGYN
IGGYFNITNDLTVAASYLSPINMKYKGQLSTASGAFVNPASDFTTPFSDNLEQPSEIKVGAEYIMGRFSVNADYKKVAWG
SAKGYKDFGWEDQDVYSLGAKFATNNYWLGAGYNYGSNPIKEQDGTSYKGAVINMFNNTFFPAITESHFTFGGGYSITKH
TTLEGSVVYAPEVENSVDTTAVSSAFASGMAGTPTAAASTSTTKHSQIGYTVQVKYNF

Specific function: Unknown

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47729; Mature: 47729

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTRIALAIATAAMVSTPVLATNGTNMIGLGAQSNAMGGTGVAASYGAETVIANPAMIG
CCCCEEEEEEEHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEE
KTTGTEMTFGGTLFQPSVETTNNIKNSAVAAANGITSAQAAAAGAPIGSATSDADTNVIP
CCCCCEEEECCEEECCCCCCCCCCCCCCEEHHCCCCHHHHHHCCCCCCCCCCCCCCCEEE
AVSLSSRINDKLTFGIGMFGTSGMGVDYQDEDMLFNAQTNMQIMKFAPTLAFNSSKFGIG
EEEHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCEEEECCCCCCCC
VSPILQYGSLDINYQTQMTNNSGAPMYVQGGGNINSTPSATPAMKTVGHGMASDLGMGYN
HHHHHHHCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCHHHHCCCCCC
IGGYFNITNDLTVAASYLSPINMKYKGQLSTASGAFVNPASDFTTPFSDNLEQPSEIKVG
CCEEEEECCCCEEEEHHHCCCCEEEECCEECCCCCEECCCCCCCCCCCCCCCCCCCEECC
AEYIMGRFSVNADYKKVAWGSAKGYKDFGWEDQDVYSLGAKFATNNYWLGAGYNYGSNPI
HHHEEEEEECCCCHHEEECCCCCCCCCCCCCCCHHHHHCCEEECCCEEEECCCCCCCCCC
KEQDGTSYKGAVINMFNNTFFPAITESHFTFGGGYSITKHTTLEGSVVYAPEVENSVDTT
CCCCCCCCCCEEEEECCCCCCCEEECCCEEECCCEEEEEEEEECCCEEECCCCCCCCCHH
AVSSAFASGMAGTPTAAASTSTTKHSQIGYTVQVKYNF
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKKTRIALAIATAAMVSTPVLATNGTNMIGLGAQSNAMGGTGVAASYGAETVIANPAMIG
CCCCEEEEEEEHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEE
KTTGTEMTFGGTLFQPSVETTNNIKNSAVAAANGITSAQAAAAGAPIGSATSDADTNVIP
CCCCCEEEECCEEECCCCCCCCCCCCCCEEHHCCCCHHHHHHCCCCCCCCCCCCCCCEEE
AVSLSSRINDKLTFGIGMFGTSGMGVDYQDEDMLFNAQTNMQIMKFAPTLAFNSSKFGIG
EEEHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCEEEECCCCCCCC
VSPILQYGSLDINYQTQMTNNSGAPMYVQGGGNINSTPSATPAMKTVGHGMASDLGMGYN
HHHHHHHCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCHHHHCCCCCC
IGGYFNITNDLTVAASYLSPINMKYKGQLSTASGAFVNPASDFTTPFSDNLEQPSEIKVG
CCEEEEECCCCEEEEHHHCCCCEEEECCEECCCCCEECCCCCCCCCCCCCCCCCCCEECC
AEYIMGRFSVNADYKKVAWGSAKGYKDFGWEDQDVYSLGAKFATNNYWLGAGYNYGSNPI
HHHEEEEEECCCCHHEEECCCCCCCCCCCCCCCHHHHHCCEEECCCEEEECCCCCCCCCC
KEQDGTSYKGAVINMFNNTFFPAITESHFTFGGGYSITKHTTLEGSVVYAPEVENSVDTT
CCCCCCCCCCEEEEECCCCCCCEEECCCEEECCCEEEEEEEEECCCEEECCCCCCCCCHH
AVSSAFASGMAGTPTAAASTSTTKHSQIGYTVQVKYNF
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA