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The map label for this gene is lolE [C]

Identifier: 78484779

GI number: 78484779

Start: 486842

End: 488119

Strand: Reverse

Name: lolE [C]

Synonym: Tcr_0434

Alternate gene names: 78484779

Gene position: 488119-486842 (Counterclockwise)

Preceding gene: 78484780

Following gene: 78484778

Centisome position: 20.11

GC content: 43.82

Gene sequence:

>1278_bases
ATGTCCATTCAACACAGTCACCTCCCCTTCTCAATATTAATTAATTTTGCCTGGCGTAATTTATGGCGCCATCGACGAAG
AACACTGATTACTCTGACCACGATCGGGATTGGTTTTGGCTTAGCCGTGTTATTTATCGGCATTGGCGATGGAAGCCATA
ACTCTATGGTTCGTAATGCCATTAAGATGGGGGAAGGTCACTTAACGGTTCAACCAAGGGGTTATCAAGAAGCTCCTGCC
AACTATAAGTTCATTCACAATGGCAAAGCGCTTTATCAACAACTCAAAGACCTGCTCCTTGAGGCGAACGTTGCCCCTCG
TATTTCTTTACAAGTTCTTGCCAGTACCGCCAGCAATTCAACTGGAGCCATGCTCGAAGGCATGCAATCCCAACTGGATA
CGCGCACCAACATGCTCAAACCTTTTTTAATTAAAGGACACTGGTTAACTGAAGAAGATCACCGAGGCATATTAATCGGG
CAAGGCATGGCGCGTAAACTGAAAGCTAAAGTTGGCAGCAAAGTCGTGATTATGGCGGGCAAGCAAGGAGGCGATTCCCA
AGCACAATTAGCGCGCGTCAGGGGTATTTTTAATGCCCATGTAAATGAAATGGACGACTTTCTAATCATTAGCAATTTAA
GCCTTTCGACGGAATTTCTTGTTGGGGAAGGTGCCGACCCTCTTTTAGCACCCGTGACAAGATTTGCCCTTTTTCTAAAC
AATCCCGATGATTTGAGTCATACCGAAGCAATACTTGAAAAGGCGCTTGTCGATCAAAACATTGTTGTTTTAAACTGGCA
AGAAATGATGCCACAATTAGTGCAATTCATTATTTTAGATGATGCTGGAAACTATATCTTTTTAGTACTCATTTTAATTA
TGGTGATCTTCGGAATCGTTAATACCGTTCTCATGAGTGTCTTGGAACGTACTAGAGAATTTGGTCTACTCAGAGCCTTA
GGCATTAGCCGTCGACAATTATTGTTACTGGTATTCTGTGAAGCGGTTTTATTAAGTTTTTTATCGGTCGCGATAGGATG
GTTAGTGGGTGGCAGCACCCATTTATGGTTTGCTCATCACGGCATCGACTTTTCCGCGTTAATGGCAGAAGGTACCTCAG
CAATGGGCACGTTTATGGACCCCGTAATTTACACAGAACTCTCTTGGAACCGTGTTCTTCAATTAACAATCATTGTGTTT
GCCGCCACGCTTTCAACTGGAATTTACCCAGCCATTAAAGCGGCTAAAGTAGCGCCCGTGGAGGCGTTACGAACTTAA

Upstream 100 bases:

>100_bases
AAGTCTTTCAAGCCAGTCTATTAATGATTGTATTAACCATGCTGGCCGCCTTAATCCCATCATGGCGTATTGTGCGTTTA
AAGCCTGCTGAGGTAATTTA

Downstream 100 bases:

>100_bases
ATGCGATTTAAAAGGTTTGGAGTCATAAAATGGTGCTACTGAATTTACACAACATCGGAAAATCTTACCATCAGGGTGAG
TTAGAAGTGTCTGCACTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSIQHSHLPFSILINFAWRNLWRHRRRTLITLTTIGIGFGLAVLFIGIGDGSHNSMVRNAIKMGEGHLTVQPRGYQEAPA
NYKFIHNGKALYQQLKDLLLEANVAPRISLQVLASTASNSTGAMLEGMQSQLDTRTNMLKPFLIKGHWLTEEDHRGILIG
QGMARKLKAKVGSKVVIMAGKQGGDSQAQLARVRGIFNAHVNEMDDFLIISNLSLSTEFLVGEGADPLLAPVTRFALFLN
NPDDLSHTEAILEKALVDQNIVVLNWQEMMPQLVQFIILDDAGNYIFLVLILIMVIFGIVNTVLMSVLERTREFGLLRAL
GISRRQLLLLVFCEAVLLSFLSVAIGWLVGGSTHLWFAHHGIDFSALMAEGTSAMGTFMDPVIYTELSWNRVLQLTIIVF
AATLSTGIYPAIKAAKVAPVEALRT

Sequences:

>Translated_425_residues
MSIQHSHLPFSILINFAWRNLWRHRRRTLITLTTIGIGFGLAVLFIGIGDGSHNSMVRNAIKMGEGHLTVQPRGYQEAPA
NYKFIHNGKALYQQLKDLLLEANVAPRISLQVLASTASNSTGAMLEGMQSQLDTRTNMLKPFLIKGHWLTEEDHRGILIG
QGMARKLKAKVGSKVVIMAGKQGGDSQAQLARVRGIFNAHVNEMDDFLIISNLSLSTEFLVGEGADPLLAPVTRFALFLN
NPDDLSHTEAILEKALVDQNIVVLNWQEMMPQLVQFIILDDAGNYIFLVLILIMVIFGIVNTVLMSVLERTREFGLLRAL
GISRRQLLLLVFCEAVLLSFLSVAIGWLVGGSTHLWFAHHGIDFSALMAEGTSAMGTFMDPVIYTELSWNRVLQLTIIVF
AATLSTGIYPAIKAAKVAPVEALRT
>Mature_424_residues
SIQHSHLPFSILINFAWRNLWRHRRRTLITLTTIGIGFGLAVLFIGIGDGSHNSMVRNAIKMGEGHLTVQPRGYQEAPAN
YKFIHNGKALYQQLKDLLLEANVAPRISLQVLASTASNSTGAMLEGMQSQLDTRTNMLKPFLIKGHWLTEEDHRGILIGQ
GMARKLKAKVGSKVVIMAGKQGGDSQAQLARVRGIFNAHVNEMDDFLIISNLSLSTEFLVGEGADPLLAPVTRFALFLNN
PDDLSHTEAILEKALVDQNIVVLNWQEMMPQLVQFIILDDAGNYIFLVLILIMVIFGIVNTVLMSVLERTREFGLLRALG
ISRRQLLLLVFCEAVLLSFLSVAIGWLVGGSTHLWFAHHGIDFSALMAEGTSAMGTFMDPVIYTELSWNRVLQLTIIVFA
ATLSTGIYPAIKAAKVAPVEALRT

Specific function: Part Of An ATP-Dependent Transport System Lolcde Responsible For The Release Of Lipoproteins Targeted To The Outer Membrane From The Inner Membrane. Such A Release Is Dependent Of The Sorting-Signal (Absence Of An Asp At Position 2 Of The Mature Lipoprot

COG id: COG4591

COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 46938; Mature: 46807

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQHSHLPFSILINFAWRNLWRHRRRTLITLTTIGIGFGLAVLFIGIGDGSHNSMVRNA
CCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHEEECCCCCCHHHHHHH
IKMGEGHLTVQPRGYQEAPANYKFIHNGKALYQQLKDLLLEANVAPRISLQVLASTASNS
HHCCCCEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEHEEEEECCCCC
TGAMLEGMQSQLDTRTNMLKPFLIKGHWLTEEDHRGILIGQGMARKLKAKVGSKVVIMAG
CHHHHHHHHHHHHHHHHHCCCCEEECCEECCCCCCEEEEECCHHHHHHHHCCCEEEEEEC
KQGGDSQAQLARVRGIFNAHVNEMDDFLIISNLSLSTEFLVGEGADPLLAPVTRFALFLN
CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHEEC
NPDDLSHTEAILEKALVDQNIVVLNWQEMMPQLVQFIILDDAGNYIFLVLILIMVIFGIV
CCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHH
NTVLMSVLERTREFGLLRALGISRRQLLLLVFCEAVLLSFLSVAIGWLVGGSTHLWFAHH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
GIDFSALMAEGTSAMGTFMDPVIYTELSWNRVLQLTIIVFAATLSTGIYPAIKAAKVAPV
CCCHHHHHHCCCHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCH
EALRT
HHHCC
>Mature Secondary Structure 
SIQHSHLPFSILINFAWRNLWRHRRRTLITLTTIGIGFGLAVLFIGIGDGSHNSMVRNA
CCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHEEECCCCCCHHHHHHH
IKMGEGHLTVQPRGYQEAPANYKFIHNGKALYQQLKDLLLEANVAPRISLQVLASTASNS
HHCCCCEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEHEEEEECCCCC
TGAMLEGMQSQLDTRTNMLKPFLIKGHWLTEEDHRGILIGQGMARKLKAKVGSKVVIMAG
CHHHHHHHHHHHHHHHHHCCCCEEECCEECCCCCCEEEEECCHHHHHHHHCCCEEEEEEC
KQGGDSQAQLARVRGIFNAHVNEMDDFLIISNLSLSTEFLVGEGADPLLAPVTRFALFLN
CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHEEC
NPDDLSHTEAILEKALVDQNIVVLNWQEMMPQLVQFIILDDAGNYIFLVLILIMVIFGIV
CCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHH
NTVLMSVLERTREFGLLRALGISRRQLLLLVFCEAVLLSFLSVAIGWLVGGSTHLWFAHH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
GIDFSALMAEGTSAMGTFMDPVIYTELSWNRVLQLTIIVFAATLSTGIYPAIKAAKVAPV
CCCHHHHHHCCCHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCH
EALRT
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]