| Definition | Thiomicrospira crunogena XCL-2, complete genome. |
|---|---|
| Accession | NC_007520 |
| Length | 2,427,734 |
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The map label for this gene is cheY [H]
Identifier: 78484540
GI number: 78484540
Start: 229012
End: 229914
Strand: Reverse
Name: cheY [H]
Synonym: Tcr_0195
Alternate gene names: 78484540
Gene position: 229914-229012 (Counterclockwise)
Preceding gene: 78484542
Following gene: 78484538
Centisome position: 9.47
GC content: 41.64
Gene sequence:
>903_bases ATGAAACAAGCCAATTTACTGATTGTTGAAGACGATTTAATCAGTTTAAAACTGCTTCAAAGCTTCCTAAAAACAGAAAA CTTTACTTTATACATTGCCAATGATGGGGAGGAAGCTTCTCACCTTATTCGCCAAAAACCTAAAGATTTCTTCCACTGCA TCATTTCCGATTATCTGATGCCAAATAAAGATGGCATTCAGTTGCTGGAAGAGCTTAAAGAAGACCCTGAATACAAAAAA ATTCCGTTTATTCTGCAAACCTCTGCCAACAGCGAAGCGGAAATTCAACGTGGGATTAATGCTGGCGCATTCTACTGCCT AATTAAGCCAATTACCAAAGAAACCTTAATTTCAGTTGTTAATGCCGCTTTAAAAGACTTTAAAAATCATCGTGAAGCAC TCACCACCATTGAAGGAATCAACACCGCCTTCCCACTGATGAAAAGCGGTCACTTCCAATTTCAAACGCTCGAAGAGGCC AAACATCTGTCAAATTTTATTGCGTTTCTTACCAAAGATCCCGATAACATCGGGATTGGCTATTTAGAGTTAATGATCAA TGCGGTTGAGCATGGCAACCTGGGCATAACCTACGATGAAAAAACGCAACTTATCAATGAATCTCGTTTGCACGACGAAA TCGCTTACCGCCTCAGCTTGCCCGAAAATCAGGAAAAGTATGTCACGGTCGATTTAGACCACTCTGACTCCGACCTCACG GTAACGATTACCGATATGGGATCAGGGTTTGACTATGAAAAGTATTTAGAGTTCTCCATTGAGCGCGCGATGGACAACCA CGGACGAGGGATAATGATGGCCAATAAACTGAGTTTTGATGCACTGGCGTACTCGGAAGGCGGGCGCAAAGTCTGCTGCA AAACATCTCAGTTAAAGATTTAA
Upstream 100 bases:
>100_bases ACCATTGCTTGGATTAGAGTAGCGAAGCCATTCATAAACATGTTAAGCTTATCGTACCGAATCCATCTTATAGTATTGTT TTAAAAAGGCATAAAAGGTA
Downstream 100 bases:
>100_bases TTCAAACGGCGCCATCGTCCCGCCGATAAGGCCTCAATTCGCCCCTCCAGCTCCAACATCATCAATTGACTTTGAATGTC CGATACCGGAAGTTTGCTGA
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKQANLLIVEDDLISLKLLQSFLKTENFTLYIANDGEEASHLIRQKPKDFFHCIISDYLMPNKDGIQLLEELKEDPEYKK IPFILQTSANSEAEIQRGINAGAFYCLIKPITKETLISVVNAALKDFKNHREALTTIEGINTAFPLMKSGHFQFQTLEEA KHLSNFIAFLTKDPDNIGIGYLELMINAVEHGNLGITYDEKTQLINESRLHDEIAYRLSLPENQEKYVTVDLDHSDSDLT VTITDMGSGFDYEKYLEFSIERAMDNHGRGIMMANKLSFDALAYSEGGRKVCCKTSQLKI
Sequences:
>Translated_300_residues MKQANLLIVEDDLISLKLLQSFLKTENFTLYIANDGEEASHLIRQKPKDFFHCIISDYLMPNKDGIQLLEELKEDPEYKK IPFILQTSANSEAEIQRGINAGAFYCLIKPITKETLISVVNAALKDFKNHREALTTIEGINTAFPLMKSGHFQFQTLEEA KHLSNFIAFLTKDPDNIGIGYLELMINAVEHGNLGITYDEKTQLINESRLHDEIAYRLSLPENQEKYVTVDLDHSDSDLT VTITDMGSGFDYEKYLEFSIERAMDNHGRGIMMANKLSFDALAYSEGGRKVCCKTSQLKI >Mature_300_residues MKQANLLIVEDDLISLKLLQSFLKTENFTLYIANDGEEASHLIRQKPKDFFHCIISDYLMPNKDGIQLLEELKEDPEYKK IPFILQTSANSEAEIQRGINAGAFYCLIKPITKETLISVVNAALKDFKNHREALTTIEGINTAFPLMKSGHFQFQTLEEA KHLSNFIAFLTKDPDNIGIGYLELMINAVEHGNLGITYDEKTQLINESRLHDEIAYRLSLPENQEKYVTVDLDHSDSDLT VTITDMGSGFDYEKYLEFSIERAMDNHGRGIMMANKLSFDALAYSEGGRKVCCKTSQLKI
Specific function: Putative member of a two-component regulatory system [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 34058; Mature: 34058
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQANLLIVEDDLISLKLLQSFLKTENFTLYIANDGEEASHLIRQKPKDFFHCIISDYLM CCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCC PNKDGIQLLEELKEDPEYKKIPFILQTSANSEAEIQRGINAGAFYCLIKPITKETLISVV CCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEEEECHHHHHHHHHH NAALKDFKNHREALTTIEGINTAFPLMKSGHFQFQTLEEAKHLSNFIAFLTKDPDNIGIG HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHH YLELMINAVEHGNLGITYDEKTQLINESRLHDEIAYRLSLPENQEKYVTVDLDHSDSDLT HHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCEE VTITDMGSGFDYEKYLEFSIERAMDNHGRGIMMANKLSFDALAYSEGGRKVCCKTSQLKI EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHEEECCCCCEEEECCCCCCC >Mature Secondary Structure MKQANLLIVEDDLISLKLLQSFLKTENFTLYIANDGEEASHLIRQKPKDFFHCIISDYLM CCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCC PNKDGIQLLEELKEDPEYKKIPFILQTSANSEAEIQRGINAGAFYCLIKPITKETLISVV CCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEEEECHHHHHHHHHH NAALKDFKNHREALTTIEGINTAFPLMKSGHFQFQTLEEAKHLSNFIAFLTKDPDNIGIG HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHH YLELMINAVEHGNLGITYDEKTQLINESRLHDEIAYRLSLPENQEKYVTVDLDHSDSDLT HHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCEE VTITDMGSGFDYEKYLEFSIERAMDNHGRGIMMANKLSFDALAYSEGGRKVCCKTSQLKI EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHEEECCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA