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The map label for this gene is 78484508

Identifier: 78484508

GI number: 78484508

Start: 194220

End: 194876

Strand: Reverse

Name: 78484508

Synonym: Tcr_0163

Alternate gene names: NA

Gene position: 194876-194220 (Counterclockwise)

Preceding gene: 78484509

Following gene: 78484499

Centisome position: 8.03

GC content: 43.68

Gene sequence:

>657_bases
ATGAATGCCAAACGCCCTGTCAAAAAAAGCTTTCCAACATTTTTAATCGTGCTCGGTTTAGCCATTGGCCTGACTGCAAT
TTTTATCCTGATTCCACCCCATAGAGATGAAGTTCAAGACAAACTGTTGCCTTGGAATAGCCATTTTAACGAACACAATC
AATTAGAAACACTAGGGTTGATTATTAATCAAAGTACGCCCAATGATGCCAAAGCCATCTTTGGTGATGATGTCGAAGTC
AAACTGTTCTCACACAAGGATGAGTCAAGCAAAACGGCTGAAGTGTATTTTCCCTCTATTCATATTGGAACCATTCGCGG
TGCGATTGCATTGACACTGGATGTGGATCCGAACATGCTGAATGACATCTACAGCCAAGGCATTCAGACAACGGTCACTC
AAACAGGTAATCGCCAAGTCACGCCCAACACCGAAAACATCAATTTATTGTTACAGCGACCGATTAAACAAGTGACGTTG
CTTCCGAAAAAACACCTTACAGAGAGAGCGGTTAAAATGCGTTTTGGAGACCCACAACGCATTGAAAAACAATCCGATGG
CCTAGACCACTGGTTTTACCCAGAAAAAGGTCTGGAGTTGATTATGGACCCAGAAGGGCCCGAAGCGTTACAGTACTACC
CGCAAGCCAGAAAGTGA

Upstream 100 bases:

>100_bases
GTAACACCGACTCAAACGCTGAACTTGGGGAAGGGGATGACGAAGTGCATCACAAAAACCACAAACAACTTAACTCAAAA
GAAACGGATAATACTGACGC

Downstream 100 bases:

>100_bases
TGGATAAAAATTAATTAAACGCCCTTATTAAAGATTAAAGGGCTTCTTTTTTCCAGTGGCCGCTTTTGCCACCTTTTTTC
TCTAATAACTGGACTTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNAKRPVKKSFPTFLIVLGLAIGLTAIFILIPPHRDEVQDKLLPWNSHFNEHNQLETLGLIINQSTPNDAKAIFGDDVEV
KLFSHKDESSKTAEVYFPSIHIGTIRGAIALTLDVDPNMLNDIYSQGIQTTVTQTGNRQVTPNTENINLLLQRPIKQVTL
LPKKHLTERAVKMRFGDPQRIEKQSDGLDHWFYPEKGLELIMDPEGPEALQYYPQARK

Sequences:

>Translated_218_residues
MNAKRPVKKSFPTFLIVLGLAIGLTAIFILIPPHRDEVQDKLLPWNSHFNEHNQLETLGLIINQSTPNDAKAIFGDDVEV
KLFSHKDESSKTAEVYFPSIHIGTIRGAIALTLDVDPNMLNDIYSQGIQTTVTQTGNRQVTPNTENINLLLQRPIKQVTL
LPKKHLTERAVKMRFGDPQRIEKQSDGLDHWFYPEKGLELIMDPEGPEALQYYPQARK
>Mature_218_residues
MNAKRPVKKSFPTFLIVLGLAIGLTAIFILIPPHRDEVQDKLLPWNSHFNEHNQLETLGLIINQSTPNDAKAIFGDDVEV
KLFSHKDESSKTAEVYFPSIHIGTIRGAIALTLDVDPNMLNDIYSQGIQTTVTQTGNRQVTPNTENINLLLQRPIKQVTL
LPKKHLTERAVKMRFGDPQRIEKQSDGLDHWFYPEKGLELIMDPEGPEALQYYPQARK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24718; Mature: 24718

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKRPVKKSFPTFLIVLGLAIGLTAIFILIPPHRDEVQDKLLPWNSHFNEHNQLETLGL
CCCCCCCHHHCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHCCCCCCCCCCCCCEEEEEE
IINQSTPNDAKAIFGDDVEVKLFSHKDESSKTAEVYFPSIHIGTIRGAIALTLDVDPNML
EEECCCCCCCCEEECCCEEEEEEECCCCCCCEEEEEECEEEEEEECCEEEEEEECCCHHH
NDIYSQGIQTTVTQTGNRQVTPNTENINLLLQRPIKQVTLLPKKHLTERAVKMRFGDPQR
HHHHHCCCEEEEECCCCEEECCCCCCEEHEECCCHHHHHCCCHHHHHHHHHHHCCCCHHH
IEKQSDGLDHWFYPEKGLELIMDPEGPEALQYYPQARK
HHHHCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCC
>Mature Secondary Structure
MNAKRPVKKSFPTFLIVLGLAIGLTAIFILIPPHRDEVQDKLLPWNSHFNEHNQLETLGL
CCCCCCCHHHCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHCCCCCCCCCCCCCEEEEEE
IINQSTPNDAKAIFGDDVEVKLFSHKDESSKTAEVYFPSIHIGTIRGAIALTLDVDPNML
EEECCCCCCCCEEECCCEEEEEEECCCCCCCEEEEEECEEEEEEECCEEEEEEECCCHHH
NDIYSQGIQTTVTQTGNRQVTPNTENINLLLQRPIKQVTLLPKKHLTERAVKMRFGDPQR
HHHHHCCCEEEEECCCCEEECCCCCCEEHEECCCHHHHHCCCHHHHHHHHHHHCCCCHHH
IEKQSDGLDHWFYPEKGLELIMDPEGPEALQYYPQARK
HHHHCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA