| Definition | Thiomicrospira crunogena XCL-2, complete genome. |
|---|---|
| Accession | NC_007520 |
| Length | 2,427,734 |
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The map label for this gene is 78484495
Identifier: 78484495
GI number: 78484495
Start: 182287
End: 182619
Strand: Reverse
Name: 78484495
Synonym: Tcr_0150
Alternate gene names: NA
Gene position: 182619-182287 (Counterclockwise)
Preceding gene: 78484498
Following gene: 78484493
Centisome position: 7.52
GC content: 42.94
Gene sequence:
>333_bases GTGACCGCTCTTGTCAAAAATGAAAAACGCCAGCATATTCGAATTCCCGCCAATCGTCCCGTGGTGATGGTCATCAATGA TGCCAGTATCTTTGCCACCATGACCGACTTTTCAAAACATGGCATTGGCTTTATCACGCAAGCCGATGTTACACGCGGCG ATACCGTCGAAGTGCATTTTGATATTTCATACAACAAAGGATTTCATGCCTTTCAGTTTAACGCAACCGTCAAGCATTGC TTAAAAATAGAAGACAAACGCCATGTAGGCGTTCGTTTAAAGATTGATGAAAATCAATACACGGCTTTATTTGATGAGAT TTACGCGGCCTGA
Upstream 100 bases:
>100_bases GTTTTTTTATCCTTGCGCTTAATTTTTGATTTGTGAATTGGCGTCAATAGTTACTATGATGATATAAAACCAGTATGAAC AATTTATTAAGGAATAAACC
Downstream 100 bases:
>100_bases CGACTTATAAACCATTAATTTAGCCAGGCCTGGCTATTTTTAAAACGTAATCACTGGCCAAAAAGGCCCTGATGCGCCGA TAACCACCTCAATAATCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTALVKNEKRQHIRIPANRPVVMVINDASIFATMTDFSKHGIGFITQADVTRGDTVEVHFDISYNKGFHAFQFNATVKHC LKIEDKRHVGVRLKIDENQYTALFDEIYAA
Sequences:
>Translated_110_residues MTALVKNEKRQHIRIPANRPVVMVINDASIFATMTDFSKHGIGFITQADVTRGDTVEVHFDISYNKGFHAFQFNATVKHC LKIEDKRHVGVRLKIDENQYTALFDEIYAA >Mature_109_residues TALVKNEKRQHIRIPANRPVVMVINDASIFATMTDFSKHGIGFITQADVTRGDTVEVHFDISYNKGFHAFQFNATVKHCL KIEDKRHVGVRLKIDENQYTALFDEIYAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12567; Mature: 12435
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALVKNEKRQHIRIPANRPVVMVINDASIFATMTDFSKHGIGFITQADVTRGDTVEVHF CCCCCCCCCCCEEECCCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEE DISYNKGFHAFQFNATVKHCLKIEDKRHVGVRLKIDENQYTALFDEIYAA EEEECCCEEEEEECCHHEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure TALVKNEKRQHIRIPANRPVVMVINDASIFATMTDFSKHGIGFITQADVTRGDTVEVHF CCCCCCCCCCEEECCCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEE DISYNKGFHAFQFNATVKHCLKIEDKRHVGVRLKIDENQYTALFDEIYAA EEEECCCEEEEEECCHHEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA