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The map label for this gene is yfhC [H]

Identifier: 78484399

GI number: 78484399

Start: 64517

End: 65083

Strand: Reverse

Name: yfhC [H]

Synonym: Tcr_0053

Alternate gene names: 78484399

Gene position: 65083-64517 (Counterclockwise)

Preceding gene: 78484404

Following gene: 78484393

Centisome position: 2.68

GC content: 37.74

Gene sequence:

>567_bases
ATGTCGATTTTAGAGATTATTAAATCCCGCCGTACGATTTATCAATTTAAACCAAAATTAATTTCCCTTAATTATCTTAA
TCAATGTCTTGAGGCAGCGATTTGGGCACCCAATCACAAAATAACCGAACCCTGGCGATTTTGGGTCATTGGTAAAGAAA
CACAGTCAAAATTAGCGATTATTTATGCAGAAAATAGGGCATTAAAACGCGCTGAAAAGGGCTCTGATAGCTACGATGAT
ATTTACCAAAAAGCTTTAGCTAAATTTTTAGCGATTCCTCAAGTCATTTTGGTGGGTCAATTGTTAGCAAATGACAATAT
CACGATTCAAGAAGATTACGCGGCTTGCAGTTGCGCCATTCAAAACTTTCAGTTAGCCGCCTGGGAACTTGAAATAGGGG
TTCAATGGAGTACGGGCCCCATTATTGAAGATAAACGTACCTATGACATTTTAAAAACAGATTTTTCAGACTTAAAATTA
ATCGGTGCTTTGTATATGGGCTATCCGAATTGTGTGGGGAAATCGACGCGTCAACCCATTGAGAAAGTGACTACTTATTT
AGTGTAA

Upstream 100 bases:

>100_bases
ATTGTGCATAAGTATATGGGTTTGATTTATTCTATTTTTTATCCACAATTTGTTACAGTTTATCCAGAGCAATTACCAAC
AGTTATTCAAGAGTTATTCT

Downstream 100 bases:

>100_bases
ATTTTAGAAATTTAAGGTTTCTTCTTCATCTATTAGGCTGTGCTCAATATTTAATGATTTTCGTAAAGAGCGTTTGAAAA
GTAATTTATTTTGGACAGGT

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSILEIIKSRRTIYQFKPKLISLNYLNQCLEAAIWAPNHKITEPWRFWVIGKETQSKLAIIYAENRALKRAEKGSDSYDD
IYQKALAKFLAIPQVILVGQLLANDNITIQEDYAACSCAIQNFQLAAWELEIGVQWSTGPIIEDKRTYDILKTDFSDLKL
IGALYMGYPNCVGKSTRQPIEKVTTYLV

Sequences:

>Translated_188_residues
MSILEIIKSRRTIYQFKPKLISLNYLNQCLEAAIWAPNHKITEPWRFWVIGKETQSKLAIIYAENRALKRAEKGSDSYDD
IYQKALAKFLAIPQVILVGQLLANDNITIQEDYAACSCAIQNFQLAAWELEIGVQWSTGPIIEDKRTYDILKTDFSDLKL
IGALYMGYPNCVGKSTRQPIEKVTTYLV
>Mature_187_residues
SILEIIKSRRTIYQFKPKLISLNYLNQCLEAAIWAPNHKITEPWRFWVIGKETQSKLAIIYAENRALKRAEKGSDSYDDI
YQKALAKFLAIPQVILVGQLLANDNITIQEDYAACSCAIQNFQLAAWELEIGVQWSTGPIIEDKRTYDILKTDFSDLKLI
GALYMGYPNCVGKSTRQPIEKVTTYLV

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21483; Mature: 21352

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILEIIKSRRTIYQFKPKLISLNYLNQCLEAAIWAPNHKITEPWRFWVIGKETQSKLAI
CCHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEE
IYAENRALKRAEKGSDSYDDIYQKALAKFLAIPQVILVGQLLANDNITIQEDYAACSCAI
EEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
QNFQLAAWELEIGVQWSTGPIIEDKRTYDILKTDFSDLKLIGALYMGYPNCVGKSTRQPI
HCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHH
EKVTTYLV
HHHHHHCC
>Mature Secondary Structure 
SILEIIKSRRTIYQFKPKLISLNYLNQCLEAAIWAPNHKITEPWRFWVIGKETQSKLAI
CHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEE
IYAENRALKRAEKGSDSYDDIYQKALAKFLAIPQVILVGQLLANDNITIQEDYAACSCAI
EEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
QNFQLAAWELEIGVQWSTGPIIEDKRTYDILKTDFSDLKLIGALYMGYPNCVGKSTRQPI
HCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHH
EKVTTYLV
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]