| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358812
Identifier: 78358812
GI number: 78358812
Start: 3717213
End: 3717884
Strand: Reverse
Name: 78358812
Synonym: Dde_3774
Alternate gene names: NA
Gene position: 3717884-3717213 (Counterclockwise)
Preceding gene: 78358813
Following gene: 78358811
Centisome position: 99.67
GC content: 54.76
Gene sequence:
>672_bases ATGACGCAGGATTTTTCTGAAATTTTTGCAAAGTATGAAGCGCTTGTGGCCGATGTTGATAACGTCTTCAAGCGTGTTCA GGAAGCCCACCCCGAATGTGTGACCTGTGAAAAAGGCTGTAGCGACTGTTGCTACGCGGTGTTCGACCTTTCACTGGTCG AGGCCATGTACCTGAATCACCGGTTCGGTCAGAAATTCAGTTTCGGGCCGGAACGTTCCGTTATTGTGGAACGGGCCGAT GAAACAGACCGCAAGCTTGTAAAGCTGAAACGGCAGGCTCATCGCGATGTGCAGAACGGCAGGGATGCAGAAGAAATTCT GCAGGATATGGGCCGTGTGCGCGTGCGTTGCCCCCTGCTGGGCGAAACGGACGGGTGCGAACTGTATGAATATCGCCCCA TCACCTGCCGCCTGTACGGTATTCCCACAGCCATAGGCGGCAAGGCCCACAGCTGCGGCAAGTCGGCCTTTCTGGCCGGC AAACAATACCCCACCGTCAATATCGACAGAATTCATGAACGCCTTGCACAGCTGAGCCTTGAAATCCGCGATGCCGTACA TTCGCGTTTTTCTGAGCTGCATACCGTGCTTGTGCCTGTGTCCATGGCTCTGCTTACCACTTACGACGACGCCTACCTCG GTGCAGGCGCCACCGCAAAAGGAAACGAGTGA
Upstream 100 bases:
>100_bases AACCGGCCTCACCGTCTGAATGGCATAAAACACGCAAGACCGGTGTCTTGTGGTGTGCTTTTGTATCAGGCGGCCCGGGG CGGCGAGGAGCAGACAAAGA
Downstream 100 bases:
>100_bases TGGCCATTTCCGCAAGCATGTTCCGCGACGGAACCCCGCAGGAACTTACTCCGGATCAGGAAGAACAGAAGCGGTTCATC TATGAAAAGATGTCACCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTQDFSEIFAKYEALVADVDNVFKRVQEAHPECVTCEKGCSDCCYAVFDLSLVEAMYLNHRFGQKFSFGPERSVIVERAD ETDRKLVKLKRQAHRDVQNGRDAEEILQDMGRVRVRCPLLGETDGCELYEYRPITCRLYGIPTAIGGKAHSCGKSAFLAG KQYPTVNIDRIHERLAQLSLEIRDAVHSRFSELHTVLVPVSMALLTTYDDAYLGAGATAKGNE
Sequences:
>Translated_223_residues MTQDFSEIFAKYEALVADVDNVFKRVQEAHPECVTCEKGCSDCCYAVFDLSLVEAMYLNHRFGQKFSFGPERSVIVERAD ETDRKLVKLKRQAHRDVQNGRDAEEILQDMGRVRVRCPLLGETDGCELYEYRPITCRLYGIPTAIGGKAHSCGKSAFLAG KQYPTVNIDRIHERLAQLSLEIRDAVHSRFSELHTVLVPVSMALLTTYDDAYLGAGATAKGNE >Mature_222_residues TQDFSEIFAKYEALVADVDNVFKRVQEAHPECVTCEKGCSDCCYAVFDLSLVEAMYLNHRFGQKFSFGPERSVIVERADE TDRKLVKLKRQAHRDVQNGRDAEEILQDMGRVRVRCPLLGETDGCELYEYRPITCRLYGIPTAIGGKAHSCGKSAFLAGK QYPTVNIDRIHERLAQLSLEIRDAVHSRFSELHTVLVPVSMALLTTYDDAYLGAGATAKGNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25029; Mature: 24898
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDFSEIFAKYEALVADVDNVFKRVQEAHPECVTCEKGCSDCCYAVFDLSLVEAMYLNH CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHH RFGQKFSFGPERSVIVERADETDRKLVKLKRQAHRDVQNGRDAEEILQDMGRVRVRCPLL HCCCCCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCC GETDGCELYEYRPITCRLYGIPTAIGGKAHSCGKSAFLAGKQYPTVNIDRIHERLAQLSL CCCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH EIRDAVHSRFSELHTVLVPVSMALLTTYDDAYLGAGATAKGNE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC >Mature Secondary Structure TQDFSEIFAKYEALVADVDNVFKRVQEAHPECVTCEKGCSDCCYAVFDLSLVEAMYLNH CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHH RFGQKFSFGPERSVIVERADETDRKLVKLKRQAHRDVQNGRDAEEILQDMGRVRVRCPLL HCCCCCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCC GETDGCELYEYRPITCRLYGIPTAIGGKAHSCGKSAFLAGKQYPTVNIDRIHERLAQLSL CCCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH EIRDAVHSRFSELHTVLVPVSMALLTTYDDAYLGAGATAKGNE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA